DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and Slc3a2

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001154885.1 Gene:Slc3a2 / 17254 MGIID:96955 Length:565 Species:Mus musculus


Alignment Length:670 Identity:153/670 - (22%)
Similarity:244/670 - (36%) Gaps:240/670 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TIAEDTFVAASS------NPEKVDMVQDEKAAHADGADEQMLGSNG-VEDKLAERRDEVKFIKGD 104
            |:::||.|....      .|||    |...||....|.|:    || |:.|:||  ||       
Mouse    39 TMSQDTEVDMKDVELNELEPEK----QPMNAADGAAAGEK----NGLVKIKVAE--DE------- 86

  Fly   105 HQNGDAKIDIGTVNGGKPAFTGMSKEELMKYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIG 169
                       |..|.|  |||:|||||:|.|..|.|||.||...:.||..|:|||.||::||:.
Mouse    87 -----------TEAGVK--FTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVR 138

  Fly   170 APKCAAPQPLP---WYKRGPHAKFASVETCRPEDVQVAKKLVSAGAIYELPAALTY--------- 222
            ||:|   :.||   |:.:|...:...::.....|         ||.|..|.:.|.|         
Mouse   139 APRC---RELPVQRWWHKGALYRIGDLQAFVGRD---------AGGIAGLKSHLEYLSTLKVKGL 191

  Fly   223 ----------------DVKK--PEV--EEKIKHLVALYQGSDTRVILDLTPNYAAKNSQLV---Q 264
                            |:|:  |.:  :|..|.|:...:.....:||||||||..:|:..:   .
Mouse   192 VLGPIHKNQKDEINETDLKQINPTLGSQEDFKDLLQSAKKKSIHIILDLTPNYQGQNAWFLPAQA 256

  Fly   265 DAIANPEKRSAFVWVSGGKALPNNWLKVGGNRSAWEKVGDNYVLSQFEDGYYDLKMNSTIIRNEF 329
            |.:|...|.:...|:..|         |.|              .||.|  ....||:.:...|:
Mouse   257 DIVATKMKEALSSWLQDG---------VDG--------------FQFRD--VGKLMNAPLYLAEW 296

  Fly   330 GAVLKH-----LVALGVRGFRLKNTKFFALFDSLEDEQISSSPKDFSLGPNEYGFYSHRQ----T 385
            ..:.|:     |:..|.....|:  :...:.:|..|..::||....|.      |...|.    |
Mouse   297 QNITKNLSEDRLLIAGTESSDLQ--QIVNILESTSDLLLTSSYLSNST------FTGERTESLVT 353

  Fly   386 TFLSGLG---------------DVLYDYLSIVKNASDEAFFSVAEDVMEPQVYQL------SGDS 429
            .||:..|               |.:.|:|.                    ::|||      ....
Mouse   354 RFLNATGSQWCSWSVSQAGLLADFIPDHLL--------------------RLYQLLLFTLPGTPV 398

  Fly   430 GAYGIDLPMYGNFVKVLSKSKPDTSLQKELDNTLAQSGTDSWLQWNLADVY-VDTP--------- 484
            .:||.:|.:.|        :.|....:..|            :.||.:.:: :..|         
Mouse   399 FSYGDELGLQG--------ALPGQPAKAPL------------MPWNESSIFHIPRPVSLNMTVKG 443

  Fly   485 --QDPSALAMFLSLLPGVPVVAVDAVAYQNVTEETYRQITSLR-KTASYMHGNLNLYQADP-LVA 545
              :||.:|                      :|:  :|:::.|| |..|.:||:.:...:.| |.:
Mouse   444 QNEDPGSL----------------------LTQ--FRRLSDLRGKERSLLHGDFHALSSSPDLFS 484

  Fly   546 FSRIKSGNPGYFVIFNPTELPQ-----ASNFTIPDNLP--DKMTVSYFSEQYNNNMDNSGKVAHA 603
            :.|....|..|.|:.|..:..:     |||.....:||  .|:.:|..|.:.:...|.|      
Mouse   485 YIRHWDQNERYLVVLNFRDSGRSARLGASNLPAGISLPASAKLLLSTDSARQSREEDTS------ 543

  Fly   604 GRVNLKDLKVAPHSSIILTY 623
              :.|::|.:.|:..::|.:
Mouse   544 --LKLENLSLNPYEGLLLQF 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 126/561 (22%)
Slc3a2NP_001154885.1 SLC3A2_N 85..156 CDD:292647 38/93 (41%)
AmyAc_family 139..468 CDD:298606 80/437 (18%)
AmyA 169..513 CDD:223443 83/449 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I9042
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.712175 Normalized mean entropy S6632
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 1 1.000 - - FOG0004629
OrthoInspector 1 1.000 - - oto92084
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4341
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.730

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