DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and si:dkey-202g17.3

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_001343266.1 Gene:si:dkey-202g17.3 / 100003805 ZFINID:ZDB-GENE-131127-371 Length:487 Species:Danio rerio


Alignment Length:557 Identity:109/557 - (19%)
Similarity:192/557 - (34%) Gaps:181/557 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 AFTGMSKEELMKYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQPLPWYKRGPH 187
            |:..:|:|||.:.|..|.|.:.|....:|||..|:.:|..|:||:|.:|:..:| .|.|::|...
Zfish    45 AWKPLSREELERCAGGPQWRKFRRRLVLCFWICWMLLLGAAVLIVIRSPRATSP-VLHWWQRDLI 108

  Fly   188 AKFAS---VETCRPEDVQVAK--------KLVSAGAIY--ELPAALTYDVKKPEVEEKIKHLVAL 239
            .:...   ::..|.:|.::.:        |.|.|||:.  .|....:......|:::.:..|..|
Zfish   109 YRLQPMLFLDADRQQDSRINRVCERLPYLKSVGAGAVILEGLFGNSSSSTNLTEIDQNLGTLPQL 173

  Fly   240 YQ------GSDTRVILDLTPNYAAKNSQLVQDAIANPEKRSAFVWVSGGKALPNNWLKVGGNRSA 298
            .|      .:..||||||..          .|...........||....:::             
Zfish   174 TQLITESRKAGVRVILDLCE----------LDLFEQESNNDTAVWSGASESI------------- 215

  Fly   299 WEKVGDNYVLSQFEDGYYDLKMNSTIIRNEFGAVLKHLVALGVRGFRLKNT-------------K 350
                       |:...|:                |.|    ||.||.:.:|             |
Zfish   216 -----------QYSLRYW----------------LDH----GVSGFGICDTDAAFSAKTLMEWNK 249

  Fly   351 FFALFDSLEDEQISSSPKDFSLGPNEYGFYSHRQTTFLSGLGDVLYDYLSIVKNASDEA---FFS 412
            ....|.|.:||:|                ...|||      |:.|     .|.|.|..|   ...
Zfish   250 LMQEFSSQDDERI----------------LMVRQT------GNTL-----PVLNVSSFAGSLVEL 287

  Fly   413 VAEDVMEPQVYQLSGDSGAYGIDLPMYGNFVKVLSKSKPDTSLQKELDNTLAQSGTDSWLQWNLA 477
            |.:.::.|..:.||....|..|::.:                          |.....|..|.:.
Zfish   288 VTKSLIPPSHHPLSTAEVAEAIEVSL--------------------------QMPQRDWPSWTVG 326

  Fly   478 DVYVDTPQDPS-ALAMFLSLLPGVPVVAV-DAVA--------------YQNVTEETYRQITSLRK 526
            .   ..|::.: |:.:.:..|||.|::.. |.::              :|::::...|:......
Zfish   327 G---GVPRELNRAILLLIMTLPGTPIIKYGDELSSAQGWNRLNQPLALFQSLSQSRAREEALHFG 388

  Fly   527 TASYMHGNLNLYQAD-------PLVAFSRIKSGNPGYFVIFNPTELPQASNFTIPDNLPDKMTVS 584
            ..:::..|.:|..:.       ||:|:.| ..|...:.|:||....|...:   ||..|......
Zfish   389 RFTFLSFNTSLPSSSGLNTTDTPLLAYLR-SWGCVHFLVLFNLGSAPHTMD---PDWAPSLPEGG 449

  Fly   585 YFSEQYNNNMDNSGKVAHAGRVNLKDLKVAPHSSIIL 621
            .|       :.::| :...|.|:|..:|:.||.:|::
Zfish   450 VF-------VTSTG-LDRFGPVSLNTIKMQPHEAIVI 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 101/527 (19%)
si:dkey-202g17.3XP_001343266.1 SLC3A2_N 49..105 CDD:292647 21/56 (38%)
AmyAc_family 93..404 CDD:298606 70/421 (17%)
Alpha-amylase 132..362 CDD:278554 59/339 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 1 1.000 - - FOG0004629
OrthoInspector 1 1.000 - - otm25025
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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