DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsx and DMRT3

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_067063.1 Gene:DMRT3 / 58524 HGNCID:13909 Length:472 Species:Homo sapiens


Alignment Length:530 Identity:131/530 - (24%)
Similarity:187/530 - (35%) Gaps:154/530 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GSSIS--PRTP----PNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQTALRR 91
            |..:|  ||.|    |.||||||||:...||||||||:|:.||||||.|..:||||||.|.||||
Human    12 GGPVSQPPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRR 76

  Fly    92 AQAQDEQRAL---HMHEVPPANPAATTLLSHHHHVAAPAHVHAHHVHAHHAHGGHHSHHGHVLHH 153
            .||.:...:|   .:..:|...|....       ||||                         ..
Human    77 QQANESLESLIPDSLRALPGPPPPGDA-------VAAP-------------------------QP 109

  Fly   154 QQAAAAAAAAPSAPASHLGGSSTAASSIHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQN 218
            ..|:..:...|..||:.|    .||:::...|......:.|..|......:......|       
Human   110 PPASQPSQPQPPRPAAEL----AAAAALRWTAEPQPGALQAQLAKPDLTEERLGDGKS------- 163

  Fly   219 HHQHPHQQPATQTALRSPPHSDHGGSVGPATSSSGGGAPSSSNAAAATSSNGSSGGGGGGGGGSS 283
                     |..|.:.|...:|...|...| .|.|...|.|....:...         ||.....
Human   164 ---------ADNTEVFSDKDTDQRSSPDVA-KSKGCFTPESPEIVSVEE---------GGYAVQK 209

  Fly   284 GGGAGGGRSSGTSVITSADHHMTTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGAN 348
            .||....|..........:|.:         :||           .||...||.|:..||.    
Human   210 NGGNPESRPDSPKCHAEQNHLL---------IEG-----------PSGTVSLPFSLKANRP---- 250

  Fly   349 VPLGQDVFLDYCQKLLEKFRYPWELMPLMYVILKDADANIEEASRRIEEARVEI---NRTVAQIY 410
             ||          ::|:|. :|.:...::.:|||....::..|...:..:|..:   .||.|:  
Human   251 -PL----------EVLKKI-FPNQKPTVLELILKGCGGDLVSAVEVLLSSRSSVTGAERTSAE-- 301

  Fly   411 YNYYTP--MALVNGAPMY----LTYP-SIEQGRYGAHFTHLPLTQICPPT-----------PEPL 457
                 |  :||.:...::    .:|| |..:...|:.|.       .|.|           |.||
Human   302 -----PESLALPSNGHIFEHTLSSYPISSSKWSVGSAFR-------VPDTLRFSADSSNVVPSPL 354

  Fly   458 ALSRSPSSPSGPSAVHNQKPSRPGSSNGTVHSAASPTMVTTMATTSSTPTLSRRQRSRSATPTTP 522
            |   .|..|..|     |.|..|.....|:..:.|...:....|..:|.||.::.:.||...:  
Human   355 A---GPLQPPFP-----QPPRYPLMLRNTLARSQSSPFLPNDVTLWNTMTLQQQYQLRSQYVS-- 409

  Fly   523 PPPPPAHSSS 532
              |.|::|:|
Human   410 --PFPSNSTS 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137 32/48 (67%)
DSX_dimer 353..404 CDD:285978 8/53 (15%)
DMRT3NP_067063.1 DM 25..71 CDD:279137 31/45 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..128 11/74 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..191 9/52 (17%)
CUE_DMA_DMRTA3 247..289 CDD:270602 11/57 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..472
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383821at33208
OrthoFinder 1 1.000 - - FOG0006418
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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