DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsx and dmrta2

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001007065.2 Gene:dmrta2 / 474350 ZFINID:ZDB-GENE-041116-2 Length:440 Species:Danio rerio


Alignment Length:544 Identity:129/544 - (23%)
Similarity:169/544 - (31%) Gaps:213/544 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRALH 102
            ||| |.||||||||:...||||||||:::.|.|.||.|.|:||||||.|.||||.|||:|..|..
Zfish    54 PRT-PKCARCRNHGVVSALKGHKRYCRWKDCMCAKCTLIAERQRVMAAQVALRRQQAQEENEARE 117

  Fly   103 MHEVPPANPAATTLLSHHHHVAAPAHVHAHHVHAHHAHGGHHSHHGHVLHHQQAAAAAAAAPSAP 167
            :.           ||                         :.:..|..|    |||.....|...
Zfish   118 LQ-----------LL-------------------------YGTAEGLAL----AAANGIIPPRQN 142

  Fly   168 ASHLGGSSTAASSIHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQNHHQHPHQQ-PATQT 231
            ....|..|..::|  |.::.                             |.....|... |.|.|
Zfish   143 YEVFGPVSNESNS--GESNI-----------------------------QKFELFPKTPLPGTVT 176

  Fly   232 ALRSPPHSDHGGSVGPATSS-SGGGAPSSSNAAAATSSNGSSGGGGGGGGGSSGGGAGGGRSSGT 295
                 ||...|.||...|.| .|..:|...:                 |.||..|       ...
Zfish   177 -----PHQAAGKSVSTDTESVPGMSSPDMRH-----------------GSGSENG-------DRE 212

  Fly   296 SVITS------ADHHMTTVP---TPAQSLEGS---CDSSSPSPSSTSGAAILPISVSVNRKNGAN 348
            |:::|      .|...|  |   :|..|..||   .|...|||||.:...:..|.:...      
Zfish   213 SIVSSPIAKPLKDGEET--PGSISPIGSDSGSDTDKDEQEPSPSSAASRQMNAIDILTR------ 269

  Fly   349 VPLGQDVFLDYCQKLLEKFRYPWELMPLMYVIL----KDADANIEEASRRIEEARVEINRTVAQI 409
                  ||.::.:.:||             ::|    ||....||:......:|:.......|:.
Zfish   270 ------VFPNHKRSVLE-------------LVLQGCGKDVVQAIEQILNNSGQAKGPEETWTAER 315

  Fly   410 YYNYYTPMALVNGAPMYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLALS-RSPSSPSGPSAVH 473
            ......|.......||                           .|..:.|| ||..||..|:|.|
Zfish   316 MLQSVQPTMSSTPRPM---------------------------LPGTMTLSNRSAFSPLQPNAPH 353

  Fly   474 NQKPSRPGSSNGTVHSAASP------------TMVTTMATTSSTPTLSRRQRSRSATPTTPPPPP 526
              ..|.|.:...:.|...:|            ..:...:||...|||..|           ||..
Zfish   354 --FGSDPSTYPLSTHLGLNPLRLAYSAHSRGLAFMAPYSTTGLMPTLGFR-----------PPMD 405

  Fly   527 PAHSS--------------SNGAY 536
            .|.|.              :||.|
Zfish   406 YAFSDLIRDRTLLHKDQSYTNGLY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137 29/44 (66%)
DSX_dimer 353..404 CDD:285978 10/54 (19%)
dmrta2NP_001007065.2 DM 55..101 CDD:279137 31/46 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..261 32/124 (26%)
CUE_DMA_DMRTA2 259..300 CDD:270601 10/65 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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