DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsx and dmrt1

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_991191.2 Gene:dmrt1 / 402923 ZFINID:ZDB-GENE-050511-1 Length:267 Species:Danio rerio


Alignment Length:308 Identity:90/308 - (29%)
Similarity:133/308 - (43%) Gaps:71/308 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SGSSISPRTP---PNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQTALRRAQ 93
            :..|:|.|.|   |.|:||||||....||||||:|.:|.|.|:||||.|:||||||.|.||||.|
Zfish     7 TNGSLSIRKPSRMPKCSRCRNHGFVSPLKGHKRFCNWRDCQCQKCRLIAERQRVMAAQVALRRQQ 71

  Fly    94 AQDEQRALHMHEVPPANPAATTLLSHHHHVAAPAHVHAHHVHAHHAHGGHHSHHGHVLHHQQAAA 158
            ||:|:..:    ..|.|.:.:..|..:..|..         :......|..|         .|::
Zfish    72 AQEEEMGI----CSPINLSGSDTLVKNEAVGE---------NVFTLSSGPPS---------PASS 114

  Fly   159 AAAAAPSAPASHLGGSSTAASSIHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQNHHQHP 223
            :|.|:|:...|....|.:.|.|..||.......|..|:..::    :|..|:|.::.:..::|. 
Zfish   115 SATASPTNLGSRSMLSLSPAMSSRGHTDCTSDLMVDASYYNL----YQPTPYSSYYSNLYNYQQ- 174

  Fly   224 HQQPATQTALR----SPPHSDHGGSVGPATSSSGGGA----PSS-SNAAAATSSNGSSGGGGGGG 279
            :|.|:....|.    ||.:..|  |...:..|.|.||    ||: ....||..|:|:..      
Zfish   175 YQMPSGNGRLSSHNVSPQYRTH--SYYSSYLSQGLGAACVQPSTCPEPKAAAFSDGAQD------ 231

  Fly   280 GGSSGGGAGGGRSSGTSVITSADHHMTTVPTPAQSLEGSCDSSSPSPS 327
                        |...|.:.:|::.:            .|:|||.|.|
Zfish   232 ------------SVSISSMINAENKL------------ECESSSESGS 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137 30/47 (64%)
DSX_dimer 353..404 CDD:285978
dmrt1NP_991191.2 DM 18..64 CDD:279137 29/45 (64%)
Dmrt1 76..146 CDD:289167 16/91 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..137 9/43 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..267 6/10 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12322
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4813
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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