DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsx and dmrt2a

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_571027.1 Gene:dmrt2a / 30129 ZFINID:ZDB-GENE-990621-7 Length:507 Species:Danio rerio


Alignment Length:475 Identity:106/475 - (22%)
Similarity:158/475 - (33%) Gaps:171/475 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DTMS-DSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKC 73
            ||.| |.|..|..|       ..||........|.||||||||:...||||||:|::|.|.|..|
Zfish    33 DTGSKDDDKSDRLN-------LGSGDQRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANC 90

  Fly    74 RLTADRQRVMALQTALRRAQAQD------------EQRALHMHEVPPANPAATTLLSHHHHV--- 123
            .|..:||||||.|.||||.||.:            |:|.::...:.|:...|.::|..:..|   
Zfish    91 LLVVERQRVMAAQVALRRQQATEDKKGITGKQIPVERRNIYQRHIRPSTMLAKSILEGYRPVQND 155

  Fly   124 ----AAPA----------------------------HVHAHHVHAHHAHGGHHSHHGHVLH---- 152
                |.||                            :.....:.:..::.......|.::|    
Zfish   156 PFLGANPALPPPLSDRMRKRRAFADKELETIMLEREYKERELLESTQSNSASLFMPGSMVHAAEY 220

  Fly   153 -HQQAAAAAAAAPS----APASHLG---------------GSSTAASSIHGHAHAHHVHMAAAAA 197
             ..:.|.::|:|||    :|....|               |.:||...:            .::.
Zfish   221 NSYKTAFSSASAPSTVEPSPKDLCGFLPGCLDLSLQYAATGGTTANVEL------------ISSN 273

  Fly   198 ASVAQHQHQSHPHSHHHHHQNHHQHP--------------------HQQ---------------- 226
            .|||               ..:.|:|                    :||                
Zfish   274 VSVA---------------TTYRQYPLSPRFVMWPRGSSSISDALLYQQCLLNATAVQNLKPGAV 323

  Fly   227 --PATQTALRS-PPHSDHGGSVGPATSSSGGG-APSSSNAAAATSSNGSSGGGGGGGGGSSGGGA 287
              |...::..| ||..|     .||:...|.. ||.||:......   .:..|.|..||:....:
Zfish   324 WDPKMMSSTESHPPEQD-----APASRLEGSRVAPESSDLQPGPR---EAQTGLGHNGGARSAFS 380

  Fly   288 GGGRSSGTSVITSADHHMTTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGANVPLG 352
            ...|:.|......|..|...:...::      |::..:.|....:....|..::|.||       
Zfish   381 PPKRTYGQVFSPQAGSHEHVINNMSK------DTAKHTLSMKLNSFHSLIQQTLNDKN------- 432

  Fly   353 QDVFLDYCQKLLE----KFR 368
            .|....||::|||    |||
Zfish   433 PDTNRPYCKELLEEAAKKFR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137 27/44 (61%)
DSX_dimer 353..404 CDD:285978 9/20 (45%)
dmrt2aNP_571027.1 DM 57..103 CDD:279137 27/45 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383821at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.