DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsx and F21F3.4

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001362009.1 Gene:F21F3.4 / 184785 WormBaseID:WBGene00017674 Length:393 Species:Caenorhabditis elegans


Alignment Length:70 Identity:20/70 - (28%)
Similarity:29/70 - (41%) Gaps:6/70 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 MALVNGAPMYLTYPSIEQGRYGAHFTH---LPLTQICPPTPEPLALSRSPSSPSGPSAVHNQKPS 478
            |:.:|.:.:........:...|.|..|   ..:.:|.|..|..:..|.|.||.||...|   |.:
 Worm   323 MSAINSSKLKKEEKVTRKSSGGGHEEHQKPYEIRKIYPKIPVGVKRSISSSSQSGLPIV---KKA 384

  Fly   479 RPGSS 483
            |||.|
 Worm   385 RPGFS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137
DSX_dimer 353..404 CDD:285978
F21F3.4NP_001362009.1 DUF4708 12..267 CDD:374137
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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