DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsx and dmd-7

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_741551.1 Gene:dmd-7 / 179012 WormBaseID:WBGene00019521 Length:449 Species:Caenorhabditis elegans


Alignment Length:363 Identity:68/363 - (18%)
Similarity:115/363 - (31%) Gaps:111/363 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ--T 87
            |||||.||..::.      |.:|..||.::.||||...|.|..|:|:.|      ..||:::  .
 Worm    48 CGGASRSSNRTLF------CRKCEGHGQQVVLKGHASRCPFNNCSCKTC------TNVMSMRANA 100

  Fly    88 ALRRAQAQDEQRALHMHEVPPANPAATTLLSHHHHVAAPAHVHAHHVHAHHA---HGGHHSHHGH 149
            .:||.:.:..:..|.:..|            |..:......|...::....|   |..:.:.:| 
 Worm   101 IIRRYRTRTLEGGLVLKPV------------HFKNGNTRLRVFPKNIDERDALTIHFNNKNQNG- 152

  Fly   150 VLHHQQAAAAAAAAPSAPASHLGGSSTAASSIHGHAHAHHVHMAAAAAASVAQHQHQSH-PHSHH 213
             |.:..||.......:.|.     :|..|::|....:|.:..|...:.:.....:...| |....
 Worm   153 -LANMNAAEMQMEVGAYPQ-----TSPPATAIPDSGNAQNPFMVKRSQSDQELDRQSGHTPTIVE 211

  Fly   214 HHHQNHHQHPHQQPATQTALRSPPHSDHGGSVGPATSSSGGG-------------APSSSNAAAA 265
            ...|...|.....|......:|||         |...|:..|             .|.:..|...
 Worm   212 QARQVQQQFSATNPPNYGLDQSPP---------PMPPSTANGQMPMGILSDFSLLTPETITAIKN 267

  Fly   266 TSSNGSSGGGGGGGGGSSGGGAGGGRSSGTSVITSADHHMTTVPTP------------------- 311
            ..:                       ..|..::|      ||.|||                   
 Worm   268 LFN-----------------------PQGNDIVT------TTAPTPSIFDNTFLSNLNIANGVTY 303

  Fly   312 -AQSLEGSCDSSSPSPSSTSGAAILPISVSVNRK--NG 346
             :.::.|:....:|..::.|...:.|.. .::||  ||
 Worm   304 TSANMNGNQMLMTPQVTTASSTGMFPFE-DIDRKLSNG 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137 15/44 (34%)
DSX_dimer 353..404 CDD:285978
dmd-7NP_741551.1 DM 57..108 CDD:214606 17/62 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12322
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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