DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsx and DMRT1

DIOPT Version :9

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_011516072.1 Gene:DMRT1 / 1761 HGNCID:2934 Length:390 Species:Homo sapiens


Alignment Length:394 Identity:80/394 - (20%)
Similarity:117/394 - (29%) Gaps:159/394 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 LRSPPH----------------SDHGGSVG---PAT---------------------SSSGGGAP 257
            ::||.|                :|.||:.|   |||                     :|.|.|.|
Human     1 MKSPQHGRCHAGPGLWRDAAVLADSGGAWGPGLPATLHRRSGSAGDASDPARRAELRASLGSGFP 65

  Fly   258 SSSNAAAATSSNGS--------------SGGGGGGGGG-----------SSGGGAGGGRSSGTSV 297
            :.|:.....|..||              :|..|....|           ..||......|||:|:
Human    66 TISHPVFRRSCGGSLCSRVPEIPDPALRAGNSGVRPSGLPRDPRARVPTELGGFIALEESSGSSL 130

  Fly   298 ITS--------------ADHHMTTVPTPAQSL-----EGS-------CD-SSSPSPSS--TSGAA 333
            ..|              ...|...:|:.|:.|     .||       |. :|.|.|:|  |:.|:
Human   131 PPSEVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAAS 195

  Fly   334 -----ILPISVSVNRKNGANVPLGQDVFLDYCQKLLEKFRYPWELMPL--------MYVILKDAD 385
                 |..|....:|.:..|.|   |:..|  ......|..| .|.|.        .|.:...||
Human   196 EGRMVIQDIPAVTSRGHVENTP---DLVSD--STYYSSFYQP-SLFPYYNNLYNCPQYSMALAAD 254

  Fly   386 ANIEEASRRI--------------------------EEARVEINRTVAQIY--YNYYTPMA-LVN 421
            :...|....:                          :...:|....::..|  ::||.|.: |..
Human   255 SASGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQQMKNMENRHAMSSQYRMHSYYPPPSYLGQ 319

  Fly   422 GAPMYLTY---PSIEQGRYGAHFTHLPLTQICPPTPEPLAL----SRSPSSPSGPSAVHNQKP-S 478
            ..|.:.|:   ||..:.|         .:...||:.:...|    |.||.|.....||...:| |
Human   320 SVPQFFTFEDAPSYPEAR---------ASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPAS 375

  Fly   479 RPGS 482
            .|.|
Human   376 EPSS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:279137
DSX_dimer 353..404 CDD:285978 11/84 (13%)
DMRT1XP_011516072.1 Dmrt1 146..218 CDD:289167 18/74 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6174
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12322
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4813
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.