DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsx and Dmrtc1a

DIOPT Version :10

Sequence 1:NP_001262353.1 Gene:dsx / 40940 FlyBaseID:FBgn0000504 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_038955317.1 Gene:Dmrtc1a / 108348153 RGDID:11451771 Length:289 Species:Rattus norvegicus


Alignment Length:204 Identity:41/204 - (20%)
Similarity:73/204 - (35%) Gaps:59/204 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 ASRRIEEARVEINRTVAQIYYNYYTPMALVNGAPMYLTYPSIEQG-RYGAHFTH----------- 443
            ||::.:..||:     ..:.......||....:.:::...::|:| |.|.:..|           
  Rat    83 ASKKEQATRVK-----KHVVRRQKGTMAAAPKSHVHVKKLTVEEGVRTGKNSVHQLQAQVDTATQ 142

  Fly   444 ------------LPLTQICPPTPEPLALSRSPS---SPSGPSAVHNQKPS--------------R 479
                        ||.|...|.|||.:....:.|   .|.||||:.:..||              :
  Rat   143 QESSQGPVLLSQLPETTSVPYTPETMGQQLTVSLSGEPYGPSAMPSMCPSLILQPCATTDPMLLQ 207

  Fly   480 PGSSNGTVHSAASPTMVTTMATTSSTPTLSRRQRSRS-----ATPTT--------PPPPPPAHSS 531
            |..|:.:..::.|.|:.......::...|:.:..|::     ..|.|        |.|..|...:
  Rat   208 PQGSSASNQASVSATLEWQEMLEAAEALLALKNSSQTRHQPCGMPGTAGERGLQLPNPSMPPRPA 272

  Fly   532 SNGAYHHGH 540
            |:|:...||
  Rat   273 SSGSLPSGH 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsxNP_001262353.1 DM 41..86 CDD:459924
DSX_dimer 351..398 CDD:462612 2/6 (33%)
Dmrtc1aXP_038955317.1 DMRT-like 176..288 CDD:464871 22/106 (21%)
Blue background indicates that the domain is not in the aligned region.

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