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Protein Alignment dsx and LOC100359752
DIOPT Version :9
Sequence 1: | NP_001262353.1 |
Gene: | dsx / 40940 |
FlyBaseID: | FBgn0000504 |
Length: | 572 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038953287.1 |
Gene: | LOC100359752 / 100359752 |
RGDID: | 2323488 |
Length: | 735 |
Species: | Rattus norvegicus |
Alignment Length: | 174 |
Identity: | 34/174 - (19%) |
Similarity: | 59/174 - (33%) |
Gaps: | 37/174 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 395 IEEARVEINRTVAQIYYNYYTPMALVNGAPMYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLAL 459
:.|||....|.|.|...| :...:.|...: :|..:. :.|...:|||...:.|.|.|
Rat 578 LREARPSCTRAVTQTSRN--SVAGVKNNVDI---HPGGKD-----NLTSRFITQILGKSHESLKL 632
Fly 460 SRSP----------SSPSGPSAVHNQKPSRPGSSNGTVHSAASPTMVTTMATTSSTPTLSRRQRS 514
...| .|......:.||......:.:..:.|.|:.:...|:...||..:..|
Rat 633 KSQPHIFESDLETEDSQLQQQQLANQVQEADAAEHSPIESRAARSRRQTVCLESSRASTKR---- 693
Fly 515 RSATPTTPPPPPPAHSSSNGAYHHGHHLVSSTAATXQYRNVAAA 558
..|:::...:.....||:||.. .:.|:||:
Rat 694 -------------CSSAAHQRQYSSKTQVSNTAKPKNFLNIAAS 724
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
dsx | NP_001262353.1 |
DM |
41..86 |
CDD:279137 |
|
DSX_dimer |
353..404 |
CDD:285978 |
3/8 (38%) |
LOC100359752 | XP_038953287.1 |
DUF4708 |
50..323 |
CDD:406292 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3815 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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