DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and RDH54

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_009629.6 Gene:RDH54 / 852365 SGDID:S000000277 Length:958 Species:Saccharomyces cerevisiae


Alignment Length:964 Identity:201/964 - (20%)
Similarity:322/964 - (33%) Gaps:338/964 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NESAIFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKELCDLKLHLEKLNARLEALGE 119
            ||:..|:.:|..   .:..|.|.:.:......:.||:....|..|:...|          |||.:
Yeast   142 NEAGKFLGSSML---PSDSDSLFETLFKAGSNEVQLDYELKENAEIRSAK----------EALSQ 193

  Fly   120 FLDTLRLREDQQEIKIEDNSELVDHTE------QPKWSNLYSGLNRYRQKANHTAAQFYQHKSNI 178
            .:       ..........:|.|..|:      |...|.|:| ||..::..:.| .|..:|.:.:
Yeast   194 NM-------GNPSPPTTSTTETVPSTKNDGGKYQMPLSQLFS-LNTVKRFKSVT-KQTNEHMTTV 249

  Fly   179 ----IDSLKTLYEPIQPRPAIDD---LEKQPAL--------LLVRLLK-HQQSCLKWMQ------ 221
                .:|....|.|:.....||:   :.|..|.        ||.:.|: ||:..:|:|.      
Yeast   250 PKTSQNSKAKKYYPVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGL 314

  Fly   222 ------------------FRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALT 268
                              ......|||.:|||||||||||..|.||..                .
Yeast   315 ARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWT----------------L 363

  Fly   269 LKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDK 333
            ::.|...::|.|            .:||       .|....|    |||                
Yeast   364 IRQTPFASKVSC------------SQSG-------IPLTGLC----KKI---------------- 389

  Fly   334 AVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIR 398
                                                   |||||::::..|..|....:..:.|.
Yeast   390 ---------------------------------------LVVCPVTLIGNWKREFGKWLNLSRIG 415

  Fly   399 VLTF---HGPNRHEIGIEAF----RSYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHI 456
            |||.   :.|:..::.:..|    |:|.::|..|..:::..:.......|.    :.::.||.|.
Yeast   416 VLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLI----DMLVCDEGHR 476

  Fly   457 IRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNL-------- 513
            ::|..:...|::..|.......|||||:||...:.|.::.|:|.........:|:..        
Yeast   477 LKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRAR 541

  Fly   514 ------NESML--GHRRLNFII---KPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAV 567
                  ||.:|  |..|...:|   |..:||||...|:..  :|  |...|.|.|...|:..:|.
Yeast   542 DTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEKY--LP--PKTDIILFCKPYSQQILAF 602

  Fly   568 YQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEK 632
            ..||.                 .:.|::..|                     .|..|||      
Yeast   603 KDILQ-----------------GARLDFGQL---------------------TFSSSLG------ 623

  Fly   633 ILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETD 697
                    |:..|::.|..|||:                   .||                    
Yeast   624 --------LITLLKKVCNSPGLV-------------------GSD-------------------- 641

  Fly   698 SEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPI 762
                                ...|..||          |..:..|:...|:              
Yeast   642 --------------------PYYKSHIK----------DTQSQDSYSRSLN-------------- 662

  Fly   763 FQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKERE 827
                  |.|||:::..||.:..||.:|::|.|.:...|.|:...:..........:|.:.||:|:
Yeast   663 ------SGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRD 721

  Fly   828 IVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIY 892
            .::..||.|......|||..:|||||||..|:.:::.|..|||.::.||..||:|.||.||.|||
Yeast   722 SIVTSFNRNPAIFGFLLSAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIY 786

  Fly   893 RYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGL-NLAELKKLFEM 945
            |.:....::::|...|..|..:::..|.:......:.....| |..:||.||.:
Yeast   787 RLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSV 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 183/877 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 75/375 (20%)
RDH54NP_009629.6 DUF2439 108..>158 CDD:463065 4/18 (22%)
DEXHc_RAD54 296..573 CDD:350762 75/374 (20%)
SF2_C_SNF 663..789 CDD:350180 48/125 (38%)

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