DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and CHR24

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_201200.2 Gene:CHR24 / 836516 AraportID:AT5G63950 Length:1090 Species:Arabidopsis thaliana


Alignment Length:949 Identity:187/949 - (19%)
Similarity:328/949 - (34%) Gaps:326/949 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESSSPSDTTEIHKQSCSIQDQS-----SVPVPDSSGEINNWMEPEPVDSLELSGEYADNESAIF 60
            :..|||...|..:....||:|:.     ::....:|.|.:...| |.:.::.....|:...   |
plant   198 LSKSSPDVVTTYNAGVNSIKDKQGKSGFAIREEQTSKEFSREWE-ERISNVGKQNSYSGRH---F 258

  Fly    61 VSASEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKELCDLKLHLEKLNARLEALGEFLDTLR 125
            ...||.|.:...:|:       .:.|.::::::...|:       |:| ::.::..:|. .:..:
plant   259 DDNSEDNRQGYNLDR-------GKSQCKEVDQSMKTTR-------HIE-VSEKIRTVGR-SNAAK 307

  Fly   126 LREDQQEIKIEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQF------YQHKSNIIDSLKT 184
            ||:..::   :|:.:.:          :.||......|.|..|..:      |..:|...:...|
plant   308 LRDLDED---DDDDDCL----------ILSGKKAAEMKINKPARSYNAKRHGYDERSLEDEGSIT 359

  Fly   185 LYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALI 249
            |       ..::.....|..:...|..||:..|.|:.....|. .||||.||||||||:.:.:.:
plant   360 L-------TGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQG-KGGILGDDMGLGKTMQICSFL 416

  Fly   250 LASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKT 314
            .....:|..||                                                      
plant   417 AGLFHSKLIKR------------------------------------------------------ 427

  Fly   315 KKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMS 379
                                                                     .|||.|.:
plant   428 ---------------------------------------------------------ALVVAPKT 435

  Fly   380 VMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDL---------VITSYNLVVNELK-- 433
            ::..|..|:|:.......|  .::|.:...      |.|||         ::|:|::|.|..|  
plant   436 LLPHWMKELATVGLSQMTR--EYYGTSTKA------REYDLHHILQGKGILLTTYDIVRNNTKAL 492

  Fly   434 ----RYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFAL 494
                .|.:........|:.:||||.|:|:|..|....|:.::.:.....::|||:||...:::||
plant   493 QGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWAL 557

  Fly   495 LRFVNVPNFQDLQQW-KKNL--------------NESMLGH---RRLNFIIKPLMLRRTKQKLQA 541
            ..| :.|.....:.| |:|.              .|..:|.   :.|...|:|..|||.|.  :.
plant   558 FNF-SCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKS--EV 619

  Fly   542 SGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIA 606
            .||..|...|.        .|.|:.|:..|:|..::::..||      ||::...:.:.:|    
plant   620 FGDDGATSKLS--------KKDEIVVWLRLTACQRQLYEAFL------NSEIVLSAFDGSP---- 666

  Fly   607 GHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNV 671
                                            |..|..|::.|.||     :|.....||||   
plant   667 --------------------------------LAALTILKKICDHP-----LLLTKRAAEDV--- 691

  Fly   672 KVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEV-IKDEIKEENVPWDSGD 735
                              |:..|.|.::::....|         :|.: |.|.:       |:.|
plant   692 ------------------LEGMDSTLTQEEAGVAE---------RLAMHIADNV-------DTDD 722

  Fly   736 DLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYL 800
                   |:.:.||.                  |.||..::..||.|:. ...::::.||....|
plant   723 -------FQTKNDSI------------------SCKLSFIMSLLENLIP-EGHRVLIFSQTRKML 761

  Fly   801 AIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVD 865
            .:::..|....:..|..:|...|.:|...:.:|...:...:.||:...||:||.|..|:.:::||
plant   762 NLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVD 826

  Fly   866 LHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRI 904
            ..|||..:.|:.||.||.||||...:||.|...|||::|
plant   827 PAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKI 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 166/832 (20%)
DEAD-like_helicase_N 209..534 CDD:475120 68/357 (19%)
CHR24NP_201200.2 PLN03142 323..>872 CDD:215601 162/791 (20%)
DEXHc_ERCC6L 377..614 CDD:350759 68/357 (19%)

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