DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and RAD5

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_197667.1 Gene:RAD5 / 832338 AraportID:AT5G22750 Length:1029 Species:Arabidopsis thaliana


Alignment Length:899 Identity:247/899 - (27%)
Similarity:380/899 - (42%) Gaps:227/899 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LHLEKL-NARLEALGEFLDTLRLREDQQEIK---------IEDNSELVDHTEQPKWSNLYSGLNR 159
            |.|.|: |...:|.|:        |::|.|.         :.|:|.|.: .|.|  ..|...|..
plant   297 LQLNKVKNMNQDANGD--------ENEQCISDGDLDNIVGVGDSSGLKE-METP--HTLLCELRP 350

  Fly   160 YRQKANHTAAQFYQHKSNIIDSLKTLYEPIQPRPAIDDLEKQPALLLVRLLK-------HQQSCL 217
            |:::|.|...|.  .|.|..|...|:..|......:.|..:    |:|.|..       |..|.|
plant   351 YQKQALHWMTQL--EKGNCTDEAATMLHPCWEAYCLADKRE----LVVYLNSFTGDATIHFPSTL 409

  Fly   218 KWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKE 282
                    |...||||||.||||||:..|:|:||.                 .|........|..
plant   410 --------QMARGGILADAMGLGKTVMTISLLLAH-----------------SWKAASTGFLCPN 449

  Fly   283 IRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKT 347
            ..     .|:..|...::...||      ||..|...|           ||.::  |||.:    
plant   450 YE-----GDKVISSSVDDLTSPP------VKATKFLGF-----------DKRLL--EQKSV---- 486

  Fly   348 PEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGI 412
                          |.||     ..|:||||:::.||..|:.......::.|...:|.:|.: ..
plant   487 --------------LQNG-----GNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPK-DA 531

  Fly   413 EAFRSYDLVITSYNLVVNELKRYGNT--SPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHC 475
            :.....|:|||:|.::.:|..:..:.  ..::||.|.|::|||||.|:|||:....:...|.|..
plant   532 KLLSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADR 596

  Fly   476 HWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESM-----LGHRRLNFIIKPLMLRRT 535
            .|.|||||:||...|:::||||:.:..:.....|.|.:.:..     .|.:.:..|:||:|||||
plant   597 RWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRT 661

  Fly   536 KQKLQASG-DMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLE 599
            |......| .:..||.....:|..:||::|...|..|...||..|.||:   |:|....||.|  
plant   662 KSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFV---EQGKVLHNYAS-- 721

  Fly   600 RTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALT 664
                                                  ||.|||||||.|.||.|:  |.||. |
plant   722 --------------------------------------ILELLLRLRQCCDHPFLV--MSRGD-T 745

  Fly   665 AE--DVQNV-------KVDASDVEGQ------LKMDVLAELDKFDETDSEDDCCDE--ED----- 707
            ||  |:..:       |....:.||:      ...:|:.||.|.::  .|...|.|  ||     
plant   746 AEYSDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQ--GECPICLEALEDAVLTP 808

  Fly   708 ------------STRRDGNFKLEVIKDEI-KEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQ 759
                        |.|...:....|.::.: |:|.:      ..||.|.|:..::          :
plant   809 CAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELI------TAPTESRFQVDVE----------K 857

  Fly   760 NPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAK 824
            |.:     .|:|:..::::||. |..:..|.|:.|||.::|.:::..|...::..:..:|.|:.:
plant   858 NWV-----ESSKITALLEELEG-LRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQ 916

  Fly   825 EREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPT 889
            :||.||::|:.:....|||:||.|||||:||..|::..::|..|||.:|.||..||:|.||||..
plant   917 QREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEV 981

  Fly   890 FIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKLF 943
            .|.|::.:.|||:|::::|..|..:....|.::  ||...     .:.|||.||
plant   982 KIRRFIVKGTVEERMEAVQARKQRMISGALTDQ--EVRSA-----RIEELKMLF 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 247/899 (27%)
DEAD-like_helicase_N 209..534 CDD:421690 92/338 (27%)
RAD5NP_197667.1 UBA_like_SF 9..48 CDD:419673
HIRAN 116..224 CDD:400928
HepA <186..1028 CDD:223627 245/897 (27%)
DEXDc_SHPRH-like 348..660 CDD:350766 105/390 (27%)
COG5540 <765..837 CDD:227827 14/73 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 180 1.000 Domainoid score I1043
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132523at2759
OrthoFinder 1 1.000 - - FOG0000507
OrthoInspector 1 1.000 - - mtm1031
orthoMCL 1 0.900 - - OOG6_101296
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.820

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