DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and AT3G16600

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_188282.1 Gene:AT3G16600 / 820911 AraportID:AT3G16600 Length:638 Species:Arabidopsis thaliana


Alignment Length:790 Identity:186/790 - (23%)
Similarity:308/790 - (38%) Gaps:271/790 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 TLYEPIQPRPAIDDLEK-------QPALLLVRLLKHQQSCLKWMQFRERQK--ISGGILADDMGL 239
            |:.|.:..:.|:.||::       .|.:|.|.|::||:..|.||:.:|::.  ..|||||||.||
plant    21 TVNERVIYQAALQDLKQPKTEKDLPPGVLTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGL 85

  Fly   240 GKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEP 304
            |||:|.|:|||. ::.|::.::.|:|.                          :.||        
plant    86 GKTISTISLILL-QKLKSQSKQRKRKG--------------------------QNSG-------- 115

  Fly   305 PEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPS 369
                                                                             
plant   116 ----------------------------------------------------------------- 115

  Fly   370 ANTLVVCPMSVMCQWAHEVASKVA-QNAIRVLTFHGPNR----HEIGIEAFRSYDLVITSYNLVV 429
             .||:|||.||:.|||.||..||: ::.:.||..||.:|    .||.|     ||:|:|:|.:|.
plant   116 -GTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAI-----YDVVMTTYAIVT 174

  Fly   430 NE------LKRYG----------------NTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLR 472
            ||      |.||.                :...|..|.|.||:|||||.|:|.:|....:...||
plant   175 NEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLR 239

  Fly   473 AHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNL-----NESMLGHRRLNFIIKPLML 532
            |...|.|||||::|:..|:::..||:....:.....:.:.:     .:.:.|:::|..|::.:||
plant   240 AKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYKKLQAILRGIML 304

  Fly   533 RRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYS 597
            ||||                           |.:.|:.|...|:..|.:              |:
plant   305 RRTK---------------------------EWSFYRKLELNSRWKFEE--------------YA 328

  Fly   598 LERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGA 662
            .:.|   :..||:                          |:||:||||||.|.||.|:.|.....
plant   329 ADGT---LHEHMA--------------------------YLLVMLLRLRQACNHPQLVNGYSHSD 364

  Fly   663 LTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDS----TRRDGNFKLEVIKDE 723
            .|.:....|:|...:       :::..||....:.:....|.:...    |.....|..|.:...
plant   365 TTRKMSDGVRVAPRE-------NLIMFLDLLKLSSTTCSVCSDPPKDPVVTLCGHVFCYECVSVN 422

  Fly   724 IKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTND 788
            |..:|      :..| |.:...||          ..:.:|    ..:.::..|:..::    ..|
plant   423 INGDN------NTCP-ALNCHSQL----------KHDVVF----TESAVRSCINDYDD----PED 462

  Fly   789 KIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNEKRV------LLLSLT 847
            |..:         :..:|:..:...:.|.:..:..:.|:   ...:.|.:..:      :|:||.
plant   463 KNAL---------VASRRVYFIENPSCDRDSSVACRARQ---SRHSTNKDNSISGLVCAMLMSLK 515

  Fly   848 AGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKL 912
            ||.:|||:..|:|::::||.|||..|.||.||.:|.|||:...:.|...::|||:||.:|.:.|.
plant   516 AGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERKR 580

  Fly   913 EIAKVVLPEE 922
            .|....|.|:
plant   581 NIVASALGEK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 186/790 (24%)
DEAD-like_helicase_N 209..534 CDD:421690 93/358 (26%)
AT3G16600NP_188282.1 SNF2_N 56..357 CDD:278600 117/476 (25%)
DEXDc 76..250 CDD:238005 75/279 (27%)
RING 395..431 CDD:214546 6/41 (15%)
Helicase_C <508..552 CDD:278689 21/43 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132523at2759
OrthoFinder 1 1.000 - - FOG0000507
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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