DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and rad54l2

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001076824.1 Gene:rad54l2 / 733747 XenbaseID:XB-GENE-5829376 Length:1396 Species:Xenopus tropicalis


Alignment Length:1061 Identity:229/1061 - (21%)
Similarity:377/1061 - (35%) Gaps:360/1061 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EIHKQSCSIQDQSSVPVPDS--SGEINNWMEPEPVDSLELSGEYADNESAIFVSASEYNEKKAQI 73
            |..||..:.:.|::....||  .|| ..|........   ||:.:|.      :..:..:|.|.:
 Frog    46 EDDKQDINEKSQNAALGEDSPEQGE-EGWKRSTTSGQ---SGQESDE------AKKKRLQKPANL 100

  Fly    74 DQLVQKILTMEQ--------QQRQLEENASETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQ 130
            .:.::|:|..:|        ||.:||......::..|..|.|......|:.|.|.:: ||..:..
 Frog   101 RRNIRKLLREDQLESVTKTAQQEELERRKRLEQQRKDYPLPLTLPPVSLDFLQEEIE-LRAADVS 164

  Fly   131 QEIK-------------IEDNSELVDHTEQPKWSNLYSG------LNRYRQKANHTAAQFYQHKS 176
            |.:|             .:|..::..|:.:.:...|.||      ::......|..........|
 Frog   165 QLVKSQEIICLDSSSGESDDEGKVKSHSIKDEIIELSSGEEDNLQISDNADSTNEVDGDITTENS 229

  Fly   177 --------NIIDSLKTLYEPIQPRPAIDDLEKQPALLLVRLLK-HQQSCLKWM-----QFRERQK 227
                    |..|.|..:...|...|...|:...|.  |.|.:| ||...::::     :..||..
 Frog   230 GSHVNDALNQADHLGRVLVNINHPPNEKDIFLAPQ--LARAVKSHQIGGIRFLYDNLVESLERFS 292

  Fly   228 ISGG---ILADDMGLGKTLSMIALI-LASEETKNRKREEKKKALTL-------KWTQEFNRVYCK 281
            .|.|   |||..|||||||.:|:.: :..:.|      ..|..|.:       .|..|||     
 Frog   293 GSSGFGCILAHSMGLGKTLQVISFLDVLFQHT------SAKTVLAIVPVNTLQNWLAEFN----- 346

  Fly   282 EIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVED-------- 338
                  |:....||..::...|..:.|...|.|..       |:....|....||.|        
 Frog   347 ------MWLPPPESLPKDHNQELVQPRAFKVHTMN-------DEHKTTAARAKVVNDWATDGGVL 398

  Fly   339 ----EQKDLLA--------------KTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWA 385
                |...||:              |...|.:...|||:..                        
 Frog   399 LMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQ------------------------ 439

  Fly   386 HEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVI 450
                    |..::            |||                   |......|      :.||
 Frog   440 --------QEMLK------------GIE-------------------KALSRPGP------DVVI 459

  Fly   451 LDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNL-- 513
            .||.|.|:|...:...::..:|:.....|||.|:||..::.:.::.||. |:|...:|...|:  
 Frog   460 CDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVR-PDFLGTRQEFSNMFE 523

  Fly   514 --------------NESMLGHRR--LNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSK 562
                          ::.::.:|.  |:.:::..:.||....|:|.     ||..:..:|.|:|||
 Frog   524 RPILNGQCVDSTPQDKRLMRYRSHVLHSLLEGFVQRRGHTVLKAQ-----LPFKEEHVILVRLSK 583

  Fly   563 TEMAVYQILSAISKKIFTQFLLQ-REKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLG 626
                       |.:.::|:|:.: |:.|||..                               ||
 Frog   584 -----------IQRDLYTEFMNRFRDAGNSGW-------------------------------LG 606

  Fly   627 YNPGEKILGIYILVLLLRLRQF--CC----HPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMD 685
            .||               |:.|  ||    ||    .:|..||..|::.|          :..:|
 Frog   607 LNP---------------LKAFCVCCKIWNHP----DVLYEALQKENLAN----------EQDLD 642

  Fly   686 VLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSA 750
            |       ::..:.:.|      ..:.|..|:|.            :|...|...::...||...
 Frog   643 V-------EDLGTNNRC------NAQSGKIKVEP------------NSLGALMGETAHTKQLQGI 682

  Fly   751 RALKLLNPQ----NPIFQF--------------IRPSAKLKMVIDKLEELLTGTNDKIIVTSQWV 797
                :|||.    |.:..:              ::.|.|:.::...:||.:. ..|||:|.||.:
 Frog   683 ----VLNPSHEKANQVVTYEWAKEILSDYIPGQLQNSPKMVLLFHLIEESMR-MGDKILVFSQSL 742

  Fly   798 SYLAIVR----KR----------------LQDLSWETLDFNGQLTAKEREIVLRDFN-ANNEK-R 840
            |.|:|:.    ||                ::::::..||  |..:|.|||.::..|| .:||| .
 Frog   743 STLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLD--GSTSASERERLINQFNDPSNEKVW 805

  Fly   841 VLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIK 905
            :.|||..||.:|:||..||.:::.|..|||..:.||..|:|||||.||.:|||.:...|:|::|.
 Frog   806 LFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCYIYRLVSDFTLEKKIY 870

  Fly   906 SLQDCKLEIAKVVLPEEGGEV 926
            ..|..|..::..|:.:...||
 Frog   871 DRQITKQGMSDRVVDDLNPEV 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 202/940 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 73/385 (19%)
rad54l2NP_001076824.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 14/66 (21%)
DEXHc_ARIP4 269..545 CDD:350827 71/369 (19%)
HepA <272..885 CDD:440319 179/814 (22%)
DEAH box 461..464 2/2 (100%)
LXXLL motif 1 549..553 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1117..1168
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1194..1250
LXXLL motif 2 1273..1277
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1396
Blue background indicates that the domain is not in the aligned region.

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