DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and chd1

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_009303375.1 Gene:chd1 / 563236 ZFINID:ZDB-GENE-030131-7120 Length:1778 Species:Danio rerio


Alignment Length:934 Identity:191/934 - (20%)
Similarity:342/934 - (36%) Gaps:302/934 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ESAIFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKELCDLKLHLEKLNARLEALGEF 120
            ::.:.||..|..|.|...|.||:   ...:.....||:..||     |:..:|....|....|..
Zfish   223 QATVNVSYKEDEELKTDSDDLVE---VCGEDVPPPEEDEFET-----LERVMEMRIGRKGVTGAV 279

  Fly   121 LDTLRLREDQQEIKIEDNSELVDHTEQP-------KWSNLYSGLNRYRQKANHTAAQFYQHKSNI 178
            .....:..|      .|.:...|...||       ||.|                   :.|..|.
Zfish   280 TTVYAVEAD------GDPNANFDPNRQPGEVQYLIKWKN-------------------WSHIHNT 319

  Fly   179 IDSLKTL-YEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQ---------FRERQKISGGIL 233
            .::.:|| .:.::....:|:.:|:           :|...||::         |..:|:     |
Zfish   320 WETEETLKQQNVKGMKKLDNFKKK-----------EQEKKKWLKAASPEDVEYFNCQQE-----L 368

  Fly   234 ADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKW----------------TQEF------- 275
            .||  |.....::..|:..   .|:|..........||                :::|       
Zfish   369 MDD--LHSQYQLVERIIGH---SNQKSAAGYPDYLCKWQGLPYSECSWEDGALISKKFQKCIDEY 428

  Fly   276 -NRVYCKEI--RKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDA------- 330
             :|..||.|  |...:.       |:..::.|.:|:..::..:.:.    |.|...|.       
Zfish   429 MSRNQCKTIPSRDCKVL-------KQRPRFVPMKKQPHYIGGEGLE----LRDYQLDGLNWMAHS 482

  Fly   331 ---GDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEV---- 388
               |:..::.||..  |.||.:...|.:....||...|.:     |:|.|:|.:..|..|:    
Zfish   483 WCKGNSCILADEMG--LGKTIQTISFLNYLFHEHQLYGPF-----LLVVPLSTLTSWQREIQLWA 540

  Fly   389 ---------ASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLVITSYNLVVNELKRYGNTSPLFAV 444
                     ....::|.||...:..|....:.:      ::::|:|.:::.:....||.|     
Zfish   541 PLMNVVVYLGDINSRNMIRTHEWMHPQTKRLKL------NILLTTYEILLKDKSFLGNVS----- 594

  Fly   445 YWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQW 509
             |..:.:||||.::|..:....::.:.:::....:||||:||...::::||.|:....|...:.:
Zfish   595 -WAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWEMF 658

  Fly   510 KKNLNESM-LGHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSA 573
            ::...:.. .|:..|:..::|.:|||.|:.::.|  :||    |:|    |:.:.||      ||
Zfish   659 EEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKS--LPA----KVE----QILRVEM------SA 707

  Fly   574 ISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYI 638
            :.|:.: :::|.|       ||.:|.:                             |.|      
Zfish   708 VQKQYY-KWILTR-------NYKALSK-----------------------------GTK------ 729

  Fly   639 LVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCC 703
                              |...|.|                     :::.||.|         ||
Zfish   730 ------------------GSTSGFL---------------------NIMMELKK---------CC 746

  Fly   704 DEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRP 768
            :.           ..:||        |.|..:                   ..|.|..:...:|.
Zfish   747 NH-----------CYLIK--------PPDDNE-------------------FYNRQEGLQHLVRS 773

  Fly   769 SAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRL--QDLSWETLDFNGQLTAKEREIVLR 831
            |.|| :::|||...|.....::::.||.|..|.|:.:.|  :...::.||  |.:..:.|:..|.
Zfish   774 SGKL-ILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLD--GSIKGEMRKQALD 835

  Fly   832 DFNAN-NEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYM 895
            .|||: :|....|||..|||:|:||..|:.::|.|..||||.:.|||.|.:|.||.|...|||.:
Zfish   836 HFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV 900

  Fly   896 CQDTVEQRIKSLQDCKLEIAKVVL 919
            .:.:||:.|......|:.:..:|:
Zfish   901 TKGSVEEEIIERAKKKMVLDHLVI 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 176/875 (20%)
DEAD-like_helicase_N 209..534 CDD:475120 71/383 (19%)
chd1XP_009303375.1 CD1_tandem_CHD1-2_like 258..340 CDD:349313 19/111 (17%)
CD2_tandem_CHD1-2_like 375..431 CDD:349308 6/58 (10%)
PLN03142 457..>987 CDD:215601 138/639 (22%)
CDH1_2_SANT_HL1 1112..1199 CDD:477096
DUF4208 1481..1571 CDD:464035
U2AF_lg 1661..>1751 CDD:273727
Blue background indicates that the domain is not in the aligned region.

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