DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and smarcad1b

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_005155692.3 Gene:smarcad1b / 563175 ZFINID:ZDB-GENE-091113-61 Length:955 Species:Danio rerio


Alignment Length:1024 Identity:200/1024 - (19%)
Similarity:380/1024 - (37%) Gaps:294/1024 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HKQSCSIQDQSSVPVPDSSGE-INNWMEPEPV--------DSLEL--------SGEYADNESAIF 60
            |.::.....|.:.|....:.| :.:...|.|:        ||::.        |.:.:|:.....
Zfish    97 HSRTTRSTSQQAQPAHQKASETVTDIAHPSPLKTSGMAAADSVQQRRRQQMCGSSQESDSRKGGR 161

  Fly    61 VSASEYNEKKAQIDQLVQKILTMEQQQRQLEE-NASETKELCDLKLHLEKLNARLEALGEFLDTL 124
            |||::.:|::.|..:..:::|  .:.||:... |.:|.:::  |:.|...::..||.|..|.|.:
Zfish   162 VSAADDSEEEGQRSKDQERML--RKLQRKFPHLNKNELRDV--LQEHDWLIDDALETLRMFSDLV 222

  Fly   125 RLREDQQEIKIEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLKTLYEPI 189
                    ::.||:|   ..|..|.         ::.::...|..|....|         |..|.
Zfish   223 --------VESEDDS---SQTSTPA---------KHTRRVAETRPQAQVTK---------LSSPP 258

  Fly   190 QPRPA--IDD------LEKQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMI 246
            :|:|:  :|.      :.|||.|.....:..::.|..     ....:..|:|..|..        
Zfish   259 KPKPSRPLDGTRTSQRIAKQPILAKYTYVSSEEECSD-----SEASVVNGLLDSDSD-------- 310

  Fly   247 ALILASEETKNRKREE--------KKKALT------LKWTQEFNRVYCKEIRKISMFDDEEESGK 297
                .||||.::.:.|        ....||      ||..|:..     |:|....:.|.:::.:
Zfish   311 ----QSEETLSKLKTEILCFFQSASVDELTLIAGCSLKKAQKIT-----ELRPFKTWKDLDDAMR 366

  Fly   298 EEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTP----EPEVFSSDEE 358
            ............|....|:....:.|.....:...|.:.:..|  ::.|.|    :||:.||..:
Zfish   367 RRNGLSAELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQ--VMDKGPGSMTQPEILSSTFQ 429

  Fly   359 ------------------------EEHLSNGR-----------YPSAN---TLVVCPMSVMCQWA 385
                                    .:.:..|:           |...|   .|:..|.|.:..|.
Zfish   430 LKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGNHGPHLITVPASTLDNWV 494

  Fly   386 HEVASKVAQNAIRVLTFHGP------NRHEIGIEAFRSYDLVITSYNLVVNELKRYGNTS--PLF 442
            .|:  .:...:.:||.::|.      .|:|| :.....|::::::|||.:      ||:|  .||
Zfish   495 REL--NLWCPSFKVLVYYGSADDRKYMRYEI-LNQIVEYNIIVSTYNLAI------GNSSDRSLF 550

  Fly   443 A-VYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNF--- 503
            . :.....:.||.|:::|..:.....:..:.|.....|||||:||..:::.:||.|: :||.   
Zfish   551 CKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFI-MPNMFSS 614

  Fly   504 ----------QDLQQWKKNLNESMLGHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICV 558
                      ....:.:.:.....:.|.:|  |:||.:|||.|.::     :..||         
Zfish   615 STSQIAKMFSMKSSEEQSSFERDRITHAKL--IMKPFILRRVKSEV-----LKQLP--------- 663

  Fly   559 QLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLK 623
              :|.|...:..:|                                       ||..|:|...|.
Zfish   664 --AKEEQVEFCAMS---------------------------------------ERQQELYSALLH 687

  Fly   624 SLGYNP-GEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVL 687
            .|.::. |||   ..:..::::||:...||.|.    |...|.|                |:..:
Zfish   688 KLKHSSNGEK---RELTNVMMQLRKMSNHPLLH----RQFYTTE----------------KLKAM 729

  Fly   688 AELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARA 752
            ::|..             ::.:.||.:..|      |||         |:...|.||       .
Zfish   730 SKLML-------------KEPSHRDADPAL------IKE---------DMEVLSDFE-------L 759

  Fly   753 LKLLNPQNPIFQF------IRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLS 811
            .:|....:.:.::      :..|.||.::...|.. |....|::::.||:...|.|:...|:...
Zfish   760 HRLCQQYSALHEYQLNTDVLLDSGKLSLLTQLLNS-LKEKGDRVVLFSQFTMMLDILEVFLRHHK 823

  Fly   812 WETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQA 876
            ......:|.....:|..::..||.:.:..|.|||..|||:|:||..||.:::.|:..||..::||
Zfish   824 HRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQA 888

  Fly   877 QDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGE 925
            :.|.:|.||||...:.:.:.:|::|..:..:.:.||::.:.:...:.||
Zfish   889 EGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEMTATQDGE 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 176/898 (20%)
DEAD-like_helicase_N 209..534 CDD:475120 74/402 (18%)
smarcad1bXP_005155692.3 CUE 179..215 CDD:270465 9/39 (23%)
ComEA <329..377 CDD:441164 8/52 (15%)
HepA <429..926 CDD:440319 126/622 (20%)

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