DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and dom

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster


Alignment Length:1308 Identity:229/1308 - (17%)
Similarity:412/1308 - (31%) Gaps:507/1308 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ESSSPSDTTEIHK---QSCSIQDQSSVPVPDSSGEINNWMEPEPVDSLELSGEYADNESAIFVSA 63
            ||.|..|...|.|   .:..::::.:....:|..:.::::...|...||...:....|.:..:..
  Fly   698 ESGSEDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKT 762

  Fly    64 --------SEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKEL-CDLKLHLEKLNARLEALGE 119
                    ||:..|:|..|.  :..::.:::..|..::..|..|| .|..|.:|:|.|:.::...
  Fly   763 ETPDDSDDSEFEAKEASDDD--ENTISKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQP 825

  Fly   120 FLDTLR-LREDQQEIKIEDNSELVDHTEQ---------------------PKWSNLYSGLNRYRQ 162
            .....| |.....|:..:|:|..||.||:                     .:......||.....
  Fly   826 PSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMA 890

  Fly   163 KANHTA--------AQFYQHKSNIIDSLKTLYEPIQPR----PAIDDLEKQPALLLVRLLKHQQS 215
            .|:.|:        |....:|.::::....|.|.:||:    .:.:.:...|.||...|.::|..
  Fly   891 DADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHI 955

  Fly   216 CLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYC 280
            .|.|:.....:|:: |||||:||||||:..|||:                               
  Fly   956 GLDWLVTMNERKLN-GILADEMGLGKTIQTIALL------------------------------- 988

  Fly   281 KEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLA 345
                                                                             
  Fly   989 ----------------------------------------------------------------- 988

  Fly   346 KTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRH-- 408
                          .||:..:......|:|.|.|||..|  |:..|......::||::|..:.  
  Fly   989 --------------AHLACAKGNWGPHLIVVPSSVMLNW--EMEFKKWCPGFKILTYYGSQKERK 1037

  Fly   409 --EIGIEAFRSYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQL 471
              .:|.....::.:.||||.|||.:.:.:....      |..:|||||..|:|.|:.....:...
  Fly  1038 LKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKK------WKYLILDEAQNIKNFKSQRWQLLLNF 1096

  Fly   472 RAHCHWALTGTPVQNRGVDVFALLRFVNVP----NFQDLQQWKKN-----------LNESMLGHR 521
            .......|||||:||..:::::|:.|: :|    :.::.::|..|           .||:::  .
  Fly  1097 STERRLLLTGTPLQNDLMELWSLMHFL-MPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLI--T 1158

  Fly   522 RLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQ----------------I 570
            ||:.:|:|.:|||.|::::..     :|.....:|..:||..:..:|:                :
  Fly  1159 RLHKVIRPFLLRRLKKEVEKQ-----MPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNL 1218

  Fly   571 LSAIS-----KKI-------------------------------------FTQFLLQREKGNSDL 593
            ||.|:     :|:                                     |||..|:    ..:|
  Fly  1219 LSVINVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLE----TLNL 1279

  Fly   594 NYYSLERTPQFIAGHMS------------------------DERYN--------EIYERF---LK 623
            ....||:|......|.|                        :.:|.        |:.:|.   ..
  Fly  1280 LLLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAV 1344

  Fly   624 SLGYNPGEKILGIYILVL----------------------------------------------- 641
            .:|.:|..::.|..|:.:                                               
  Fly  1345 KVGASPAMRLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTG 1409

  Fly   642 ---------LLRLRQ--------------------FCCHPGLMIGMLRGALT---------AEDV 668
                     ||..|.                    |...|....|.....||         :...
  Fly  1410 ALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTT 1474

  Fly   669 QNVKVDASDVEGQ----------LKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDE 723
            ....|.||...||          |...|.:.:.|....:.:   .:.|:.|..:..:|::.:...
  Fly  1475 SRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANGK---TEPEEETEAEDPYKVQELIQM 1536

  Fly   724 IKEENVP------------WDS----GDDLPTASSFEDQLDSARALKL----------------- 755
            .||:.:.            .|:    |:|...|  .:..:.:.|:||.                 
  Fly  1537 RKEQRLAALKRMAMINRRRTDATPIYGEDCREA--IQRCMQATRSLKRSTWQTRGYANCCTAMAH 1599

  Fly   756 -------------------LNP-----------------------------------QNPIFQFI 766
                               |.|                                   :|.:.|.:
  Fly  1600 RNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQAL 1664

  Fly   767 RPSAKL------------------------KMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRL 807
            ||...|                        ...:|:|...|.....::::.:|....|.::...|
  Fly  1665 RPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFL 1729

  Fly   808 QDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQL 872
            .......|..:|....::|:|::..||.:......:||..:||||:||..|:.::..|..|||.:
  Fly  1730 NYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTM 1794

  Fly   873 ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLA 937
            :.|||||.:|.|||:...|||.:.:.|:|..|....:.|..::.:.:  |||..|...   ...:
  Fly  1795 DAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAI--EGGNFTTTY---FKSS 1854

  Fly   938 ELKKLFEM 945
            .:|.||.|
  Fly  1855 TIKDLFTM 1862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 211/1207 (17%)
DEAD-like_helicase_N 209..534 CDD:421690 69/343 (20%)
domNP_001286676.1 HSA 543..614 CDD:214727
ASF1_hist_chap <674..831 CDD:304562 25/134 (19%)
FAM176 <824..>868 CDD:291517 9/43 (21%)
SNF2_N 952..1238 CDD:278600 80/412 (19%)
DEXDc 969..1108 CDD:238005 48/257 (19%)
Helicase_C 1692..1806 CDD:278689 31/113 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467128
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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