DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and Ino80

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster


Alignment Length:1082 Identity:217/1082 - (20%)
Similarity:367/1082 - (33%) Gaps:409/1082 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 QQQRQLEENASETKELCDLKLHLEKLN---ARLEALGEFL----------DTLRLRE-------- 128
            :|:|:.||...:..||.::|....|||   .:.|....|:          |.||:..        
  Fly   393 KQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNA 457

  Fly   129 --------DQQEIKI--EDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLK 183
                    |..|:|:  ::|:|.....:..| :..:....:.::|.....||      ..::.:|
  Fly   458 RLAAQDDYDAGEMKLLAQENAEAAMQRDLDK-TRAFDVFAKKKEKEEEEQAQ------ESVEDIK 515

  Fly   184 TLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIAL 248
            .     :|||.:.|| .||.:....|..:|...:.|:.....|.|| |||||:||||||:..||.
  Fly   516 P-----EPRPEMKDL-PQPKMFKGTLKGYQIKGMTWLANIYDQGIS-GILADEMGLGKTVQSIAF 573

  Fly   249 ILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVK 313
            :                                                            ||: 
  Fly   574 L------------------------------------------------------------CHI- 577

  Fly   314 TKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSN-GRYPSANTLVVCP 377
                                                         .||... |.:     ||:.|
  Fly   578 ---------------------------------------------AEHYGVWGPF-----LVISP 592

  Fly   378 MSVMCQWAHEVASKVAQNAIRVLTFHG-PNRHEIGIEAF----------RSYDLVITSYNLVVNE 431
            .|.:..|..|::..|..  .:|:.:.| |...:| :..|          .|:.:|||||.|||::
  Fly   593 ASTLHNWQQEMSRFVPD--FKVVPYWGSPAERKI-LRQFWDQKHLHTRDASFHVVITSYQLVVSD 654

  Fly   432 LKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLR 496
            .|.:..      :.|..::||||..|:::.:.....:..........|:|||:||...:::|||.
  Fly   655 YKYFNR------IKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH 713

  Fly   497 FVNVPNFQD----LQQW-----------KKNLNESMLGHRRLNFIIKPLMLRRTKQKLQASGDMP 546
            |: :|...|    ..:|           |..::|..:.  ||:.|:||.||||.|:      |:.
  Fly   714 FI-MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQIS--RLHMILKPFMLRRIKK------DVE 769

  Fly   547 ALPSLKIE-LICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNS------------------- 591
            ...|.||| ::...|:..:..:|:   |:.:||..:.||....|::                   
  Fly   770 NELSDKIEIMVYCPLTIRQKLLYR---ALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFR 831

  Fly   592 ----------------------------------------------------------------- 591
                                                                             
  Fly   832 KVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLF 896

  Fly   592 -DLNYYS---------------------------------LERTP-----QFIAGHMSDERYNEI 617
             |:|..|                                 ||:.|     :|......|.|| ::
  Fly   897 EDVNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRY-QL 960

  Fly   618 YERFLK---SLGYNPGEKILGIYILVLL---------------LRLRQFCCHPGLMIGMLRGALT 664
            .|..|:   :|.|.|...:|..:|...:               ..:::...|..:...:|:...:
  Fly   961 LEPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTS 1025

  Fly   665 ----AEDVQNVKVDASDVEGQ--------LKMDVLAELDKFDETDSEDD--CCDEEDSTR--RDG 713
                .|||...|::...||.|        :|:..|..|.:|.....:..  .|:.....|  .|.
  Fly  1026 LIEEMEDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDL 1090

  Fly   714 NFKLEVIK------------DEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFI 766
            ..|::.:.            .:|:........|.:|.::           .|.|..|.......:
  Fly  1091 GQKVQAVHRYLYCDSRSAAWSQIRHNQCENSQGRELVSS-----------GLALCKPHGGWSSIV 1144

  Fly   767 RP--------SAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWE------TLDF 817
            .|        :.|| .|:|.|...|.....::::.||....:.:    |::..|.      .||.
  Fly  1145 VPDKETLITDAGKL-FVLDNLLTRLKANGHRVLIYSQMTKMIDL----LEEYMWHRKHRYMRLDG 1204

  Fly   818 NGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYR 882
            :.:::|: |::| .||....:..|.|||..|||:|:||..|:.::..|..|||.:::||.||.:|
  Fly  1205 SSKISAR-RDMV-ADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1267

  Fly   883 YGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGG 924
            .||||...:||.:|:.|:|:||......|.||.::|:  .||
  Fly  1268 LGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVI--SGG 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 215/1077 (20%)
DEAD-like_helicase_N 209..534 CDD:421690 74/351 (21%)
Ino80NP_732413.1 DBINO 313..438 CDD:290603 12/44 (27%)
SNF2_N 538..840 CDD:278600 89/434 (21%)
DEXDc 555..700 CDD:238005 49/265 (18%)
Helicase_C 1156..1269 CDD:278689 37/119 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467130
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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