DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and Chd3

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_649111.1 Gene:Chd3 / 40111 FlyBaseID:FBgn0023395 Length:892 Species:Drosophila melanogaster


Alignment Length:957 Identity:188/957 - (19%)
Similarity:331/957 - (34%) Gaps:346/957 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VPVPDSSGEINNWMEPEPVD-SLELSGEYADNESAIFV---SASEYNEKKAQIDQLV---QKILT 82
            :|:|..:.:|.:|.  ..:| |:||.....:.....|:   ..|.::.:.....|::   ..::.
  Fly    80 IPLPGKAEKILSWR--WALDRSVELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQMLLHHASMVA 142

  Fly    83 MEQQQRQLEENASETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQQEIKIEDNSELVDHTEQ 147
            ..|::..:||.:.|  ||.|...:|.:...|.....|:|...|               :::|:|:
  Fly   143 SFQRRSDMEEPSLE--ELDDQDGNLHERFYRYGIKPEWLLVQR---------------VINHSEE 190

  Fly   148 PKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLK---TLYEPI----------QPRPAID--- 196
            |....:|  |.::|:.:.:.::  ::.:|:.|..|.   .||:.:          :|.|.||   
  Fly   191 PNGGTMY--LVKWRELSYNDSS--WERESDSIPGLNQAIALYKKLRSSNKGRQRDRPAPTIDLNK 251

  Fly   197 DLEKQPALLL---VRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNR 258
            ..|.||..|.   ::|...|...:.|:::...|.|. .||||:||||||:..:..:.:.      
  Fly   252 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIP-TILADEMGLGKTIQTVVFLYSL------ 309

  Fly   259 KREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRIL 323
                            |...:|:                                          
  Fly   310 ----------------FKEGHCR------------------------------------------ 316

  Fly   324 DDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHE- 387
                                                     |.:     |:..|:|.:..|..| 
  Fly   317 -----------------------------------------GPF-----LISVPLSTLTNWEREL 335

  Fly   388 ------------VASKVAQNAIRVLTFHGPNRHEIGIEAFRS-----------YDLVITSYNLVV 429
                        |..|.|:..||        :|||..|...:           :::::|||..:.
  Fly   336 ELWAPELYCVTYVGGKTARAVIR--------KHEISFEEVTTKTMRENQTQYKFNVMLTSYEFIS 392

  Fly   430 NELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFAL 494
            .:....|      .:.|..:::||||.:|::::.....:.:.|......|||||:||...::|.|
  Fly   393 VDAAFLG------CIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHL 451

  Fly   495 LRFVNVPNFQDLQQWKKNLNESMLGH--RRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELIC 557
            |.|::...|.|||.::....:.....  :||:.|::|.||||.|..:..|  ||           
  Fly   452 LNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKS--MP----------- 503

  Fly   558 VQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFL 622
               .|:|..|...||::.||.                                   |..|..:..
  Fly   504 ---PKSEFIVRVELSSMQKKF-----------------------------------YKHILTKNF 530

  Fly   623 KSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVL 687
            |:|....|.::..  :|.:::.||:.|.||.|.      ...||:.                   
  Fly   531 KALNQKGGGRVCS--LLNIMMDLRKCCNHPYLF------PSAAEEA------------------- 568

  Fly   688 AELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARA 752
                    |.|.....:....|:..|  ||:::...:|:                          
  Fly   569 --------TISPSGLYEMSSLTKASG--KLDLLSKMLKQ-------------------------- 597

  Fly   753 LKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDF 817
                                          |...|.::::.||....|.::...|:...::....
  Fly   598 ------------------------------LKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRI 632

  Fly   818 NGQLTAKEREIVLRDFN-ANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIY 881
            :|.:....|:..:..|| ..:|..|.|||..|||:|:||..|:.::|.|..|||..:.||..|.:
  Fly   633 DGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAH 697

  Fly   882 RYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAK-VVLPEEGGEVT 927
            |.||.|...|||::..::||:||..:...|:.:.. ||.|..||..|
  Fly   698 RMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTT 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 164/852 (19%)
DEAD-like_helicase_N 209..534 CDD:475120 64/350 (18%)
Chd3NP_649111.1 PHD2_CHD_II 37..79 CDD:277007
CD_CSD 82..146 CDD:475127 10/65 (15%)
CD2_tandem_CHD3-4_like 176..230 CDD:349309 14/72 (19%)
PLN03142 266..>768 CDD:215601 146/748 (20%)
Blue background indicates that the domain is not in the aligned region.

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