DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and CG4049

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_611885.3 Gene:CG4049 / 37860 FlyBaseID:FBgn0034976 Length:1669 Species:Drosophila melanogaster


Alignment Length:1115 Identity:214/1115 - (19%)
Similarity:373/1115 - (33%) Gaps:442/1115 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IHKQSCSIQDQSSVPVPDSSGEINNWMEPEPVD---------------SLELSGEYADNESAIFV 61
            :|||...|.........:|....|......|||               |..|||  ...|..:..
  Fly   245 VHKQIFRILQLDESEGIESCAVANPVEHHPPVDFPEEEIASDTFDDSNSSSLSG--GSIEDVLHK 307

  Fly    62 SASEYNEKKAQIDQLVQK--ILTMEQQQRQLEENASETKELCDLKLHLEKLNARLEALGEFLDTL 124
            .||....:...||.....  ||..|:::.:.:|:.:|:.:..:..:|:                 
  Fly   308 GASVQPSEVVTIDDSSDDDCILLSEEEEEEDDEDLNESDDATNSGMHV----------------- 355

  Fly   125 RLREDQQEIKIEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLKTLYEPI 189
               :|...:. ::|.::|.:...|                               :..:|||  :
  Fly   356 ---KDIYNVP-DENGQVVVNMAHP-------------------------------EGEETLY--L 383

  Fly   190 QPRPAIDDLEKQPALLLVRLLK-HQQSCLKWM------QFRERQKIS--GGILADDMGLGKTLSM 245
            .|:             :.:::| ||...::::      ..|...|.|  |.|||..|||||||.:
  Fly   384 APQ-------------IAKVIKPHQIGGVRFLYDNIIESTRRYNKSSGFGCILAHSMGLGKTLQV 435

  Fly   246 IA---LILASEETKNRKREEKKKAL------TLK-WTQEFNRVYCKEIRKISMFDDEEESGKEEE 300
            ::   :.|        :....|..|      ||: |..|||                        
  Fly   436 VSFCDIFL--------RHTSAKTVLCVMPINTLQNWLSEFN------------------------ 468

  Fly   301 QYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNG 365
            .:.|......:|:.:..:.|              |:.|:||.|.|:.                  
  Fly   469 MWIPRYSTDSNVRPRNFDIF--------------VLNDQQKTLTARA------------------ 501

  Fly   366 RYPSANTLVVCPMSVMCQWAHE-------------VASKVAQNAIRVLTFHGPNRHEIGIEAFRS 417
                         .|:..|.|:             :|.|:.:...|..:...|:    |:::  |
  Fly   502 -------------KVILNWVHDGGVLLIGYELFRLLALKLVKTRKRKGSVIRPD----GMDS--S 547

  Fly   418 YDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGT 482
            .||:    |||...|.:.|.         :.||.||.|.|:||......::.::|......|||.
  Fly   548 SDLM----NLVYEALVKPGP---------DLVICDEGHRIKNSHAGISLALKEIRTRRRIVLTGY 599

  Fly   483 PVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNE----------------SMLGHRR--LNFIIKP 529
            |:||..::.:.::.||. ||:...:....|:.|                .::.:|.  |:.::..
  Fly   600 PLQNNLLEYWCMVDFVR-PNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLG 663

  Fly   530 LMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLN 594
            .:.||:...||.:     ||           .|.|..:...::|..:|::..|:.          
  Fly   664 FVQRRSHTVLQLT-----LP-----------QKYEYVILVKMTAFQRKLYDTFMT---------- 702

  Fly   595 YYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCC----HPGLM 655
              .:.||..|                      .||             |:....||    ||.::
  Fly   703 --DVVRTKAF----------------------PNP-------------LKAFAVCCKIWNHPDVL 730

  Fly   656 IGMLRGALTAEDVQNVKVD----------------------ASDVEGQL--KMDVLAELDKFDET 696
            ...|:...|..|::   :|                      ||.:|.::  ..|.:..::.|.:.
  Fly   731 YNFLKKCETDLDLE---IDEEVTKGAATPIVEPSADSSLSLASPLEKKINGSGDPINSIETFSKA 792

  Fly   697 DSE-------------------DDCCDEEDSTRRDGNFK-------------------LEVIK-- 721
            :::                   ....||:......|:|.                   :||||  
  Fly   793 ENQTLFNIPASSDLNAKYLNKSPSFYDEKPEPLNYGSFGSEGKNNYWMDSSILPKPGCVEVIKQT 857

  Fly   722 ----------------------DEIKE---------ENVPWDSG-----------------DDLP 738
                                  :|||.         .|...|:|                 ..:.
  Fly   858 DTNMSSNFESITGSSEIVDLDTNEIKTVETTIQAPCSNNQLDNGCNAGKPSEWNAAGSKNSSGVA 922

  Fly   739 TASSFEDQLDSAR---------ALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTS 794
            .|..|:..|.|.:         |:.|:  :|.:...|..|.|:::....|:|.| ...|:|::.|
  Fly   923 AAEPFKKLLKSKQRNEEFSCSWAVDLM--KNYVSGLISNSPKMEIFFCILKESL-NLGDRILLFS 984

  Fly   795 QWVSYLAIVRKRL-------------QDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSL 846
            |.:..|.::...|             ::.|:..||  |..:::|||.::.:||||:..::.|:|.
  Fly   985 QSLLTLNLLEVYLKSSYVPGSNQLWTKNSSYFRLD--GSTSSQERERLVNEFNANSNVKLFLIST 1047

  Fly   847 TAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCK 911
            .||.:|:||..||.::|.|..|||..:.||..||||||||||.|:||.:....:|::|...|..|
  Fly  1048 RAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIYDRQIKK 1112

  Fly   912 LEIAKVVLPE 921
            ..::..::.|
  Fly  1113 QGMSDRIVDE 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 193/1020 (19%)
DEAD-like_helicase_N 209..534 CDD:421690 74/374 (20%)
CG4049NP_611885.3 SNF2_N 394..730 CDD:278600 94/495 (19%)
DEXDc 420..598 CDD:238005 55/273 (20%)
HELICc 958..1093 CDD:238034 49/137 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467133
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.