DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and Etl1

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:918 Identity:204/918 - (22%)
Similarity:357/918 - (38%) Gaps:287/918 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GEYADNESAIFVSASEYNEKKAQI----DQLVQKILTMEQQQRQLEE--NASETKELCDLKLHLE 108
            |.::||:.:   ...:..:.|.|:    |...:....|..|::::.:  |.:...||..:|...|
  Fly   146 GNFSDNDHS---DDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSE 207

  Fly   109 KLNARLEALGEFLDTLRLREDQQEIKIEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQ 173
            |....:..:..|.|...||:..:.|::  :.:|:::.::.        :|:     .:|.|....
  Fly   208 KKALAIIDVRPFSDWSDLRQKLESIRM--SGDLLNYAQEL--------INK-----QNTVAAILS 257

  Fly   174 HKSNIIDSLKTLYEPIQPRPAIDD---LEKQPALLL--VRLLKHQQSCLKWMQFRERQKISGGIL 233
            ..:|::..|:         .||.:   :.:||.||.  ::|..:|...|.|:....:|::: |||
  Fly   258 KCNNMVSRLE---------KAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMN-GIL 312

  Fly   234 ADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKE 298
            ||:||||||:.:||.:                            .|.||                
  Fly   313 ADEMGLGKTIQVIAFL----------------------------AYLKE---------------- 333

  Fly   299 EEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLS 363
                                                                             
  Fly   334 ----------------------------------------------------------------- 333

  Fly   364 NGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPN------RHEIGIEAFRSYDLVI 422
            ||...:|: |:|.|.|.:..|..|::....:  :.|..:||..      |.....:.|..:|:::
  Fly   334 NGLSQAAH-LIVVPSSTLDNWEAEISRWCPE--LVVEKYHGSQDERRRMRGRFAKDGFTGFDVLL 395

  Fly   423 TSYNLVVNELKRYGNT---SPLFAV-YWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTP 483
            |:|::|       |:|   ..:|.| ..:.||.||||:::|..|....::..:.|.....|||||
  Fly   396 TTYHIV-------GSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTP 453

  Fly   484 VQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESMLGHRRLNFIIKPLMLRRTKQKLQASGDMPAL 548
            :||..:::.:||.|| :|.|     :.|::.:           ||.|..::.|    :.||...:
  Fly   454 LQNNLLELISLLCFV-MPKF-----FAKSIED-----------IKSLFAKKGK----SDGDQDEV 497

  Fly   549 PSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREK----GNSDLNYYSLERTPQFIAGHM 609
            .         |..:|     ||..|  |:|...|:|:|.|    .|.......:|:.|      |
  Fly   498 S---------QFQET-----QIQRA--KRIMKPFVLRRLKKDVLKNLPKKLSLVEKVP------M 540

  Fly   610 SDER---YNEIYERFLKSLGYNPGE-----KILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAE 666
            |.::   |:|:.:.:    ..|.||     :..||   .:::.:|:...||.||           
  Fly   541 SSQQKIYYHELVDYY----SNNKGEVCSSSERAGI---AIMMEMRRIANHPLLM----------- 587

  Fly   667 DVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPW 731
              ::...|| ::.|..|.  ||....|.:|:  :....||.:...|......:.|.|..:..:| 
  Fly   588 --RHYFTDA-NLRGFSKR--LANASSFKKTN--EQYIFEELAVMSDFQVYQMMNKHEFYDVKIP- 644

  Fly   732 DSGDDLPTASSFEDQL--DSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTS 794
                         |.|  ||.:.|.|                     |.|...|.....::::.|
  Fly   645 -------------DNLICDSGKFLYL---------------------DTLLPKLKAEGHRVLLFS 675

  Fly   795 QWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVAN 859
            |:...|.||.:.|:...:.....:|......|:.::.|||.::...|.|||..|||||:||..|:
  Fly   676 QFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAAD 740

  Fly   860 HMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGG 924
            ..:|.|:.:||..::||:||.:|.||.:|..|||.:.:.|:|:.|....:.||::.|.:...|.|
  Fly   741 TCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKG 805

  Fly   925 EV--TKCV 930
            ||  .:||
  Fly   806 EVHEQRCV 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 196/874 (22%)
DEAD-like_helicase_N 209..534 CDD:421690 69/334 (21%)
Etl1NP_609320.2 SNF2_N 292..587 CDD:278600 97/464 (21%)
DEXDc 308..453 CDD:238005 50/264 (19%)
Helicase_C 651..765 CDD:278689 38/134 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467126
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.