DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and Chd2

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_063118674.1 Gene:Chd2 / 308738 RGDID:1310056 Length:1840 Species:Rattus norvegicus


Alignment Length:936 Identity:180/936 - (19%)
Similarity:321/936 - (34%) Gaps:391/936 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EINNWM---EPEPVDSLELSGEYADNESAIFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEENA 94
            ||..|:   .||.|       ||.:.:..:   |||.|::.    |:|::::.::..:       
  Rat   360 EIKQWLGKVSPEDV-------EYFNCQQEL---ASELNKQY----QIVERVIAVKTSK------- 403

  Fly    95 SETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQQEIKIEDNSELVDHTEQP----------K 149
                                .|||:                   ::...|:.:|          |
  Rat   404 --------------------SALGQ-------------------TDFPAHSRKPAPSNEPEYLCK 429

  Fly   150 WSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSL------KTL----YEPIQPRPAIDDLEKQPAL 204
            |..|     .|.:.:....|...:...:.|||.      ||:    .:.::.||....|:||||.
  Rat   430 WMGL-----PYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAY 489

  Fly   205 L---LVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKA 266
            |   .:.|..:|...|.|:. ....|.:..||||:||||||:..|:                   
  Rat   490 LGGENLELRDYQLEGLNWLA-HSWCKSNSVILADEMGLGKTIQTIS------------------- 534

  Fly   267 LTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAG 331
                                                                             
  Rat   535 ----------------------------------------------------------------- 534

  Fly   332 DKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHE--------- 387
                                 |.|....:|...|.:     |:|.|:|.:..|..|         
  Rat   535 ---------------------FLSYLFHQHQLYGPF-----LIVVPLSTLTSWQREFEIWAPEVN 573

  Fly   388 ----VASKVAQNAIRVLTF-HGPNRHEIGIEAFRSYDLVITSYNLVVNELKRYGNTSPLFAVYWN 447
                :...:::|.||...: |...:.       ..::.:||:|.:::.:      .:.|.::.|.
  Rat   574 VVVYIGDLMSRNTIREYEWIHSQTKR-------LKFNALITTYEILLKD------KTVLGSINWA 625

  Fly   448 RVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKN 512
            .:.:||||.::|..:....::...:::....:||||:||...::::||.|:....|:..:.::::
  Rat   626 FLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEED 690

  Fly   513 LNESM-LGHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISK 576
            ..:.. .|::.|:.:::|.:|||.|:.::.|  :||    |:|    |:.:.||      ||:.|
  Rat   691 HGKGRENGYQSLHKVLEPFLLRRVKKDVEKS--LPA----KVE----QILRVEM------SALQK 739

  Fly   577 KIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVL 641
            :.: :::|.|       ||.:|.:..:                                      
  Rat   740 QYY-KWILTR-------NYKALAKGTR-------------------------------------- 758

  Fly   642 LLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDE- 705
                           |...|.|                     :::.||.|         ||:. 
  Rat   759 ---------------GSTSGFL---------------------NIVMELKK---------CCNHC 778

  Fly   706 ------EDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQ 764
                  |||.|..|.   ||::                                          .
  Rat   779 YLIRAPEDSERETGQ---EVLQ------------------------------------------S 798

  Fly   765 FIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIV 829
            .||.|.|| :::|||...|....:::::.||.|..|.|:.:.|....:.....:|.:..:.|:..
  Rat   799 LIRSSGKL-ILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQA 862

  Fly   830 LRDFNAN-NEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYR 893
            |..|||: :|....|||..|||:|:||..|:.::|.|..||||.:.|||.|.:|.||.|...|||
  Rat   863 LDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYR 927

  Fly   894 YMCQDTVEQRIKSLQDCKLEIAKVVL 919
            .:.:.|||:.|......|:.:..:|:
  Rat   928 LVTKGTVEEEIIERAKKKMVLDHLVI 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 165/851 (19%)
DEAD-like_helicase_N 209..534 CDD:475120 54/339 (16%)
Chd2XP_063118674.1 None

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