DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and Smarca5

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001424549.1 Gene:Smarca5 / 307766 RGDID:1308832 Length:1072 Species:Rattus norvegicus


Alignment Length:862 Identity:179/862 - (20%)
Similarity:294/862 - (34%) Gaps:344/862 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 DHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLKTLYEPIQ---PRPAIDDLEKQPAL 204
            |.|.:.|.....:....|..|.....|.|.|..:.     ||...|::   .||.:...||| .|
  Rat    76 DPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQ-----KTPTSPLKMKPGRPRVKKDEKQ-NL 134

  Fly   205 LLVRLLKHQQ---------------------------SCLKWMQFRERQKISG------------ 230
            |.|...:|::                           |.:||.:.|:.| :.|            
  Rat   135 LSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQ-VRGLNWLISLYENGI 198

  Fly   231 -GILADDMGLGKTLSMIALILASEETKNRKREEK---KKALTLKWTQEFNRVYCKEIRKISMFDD 291
             |||||:|||||||..|:|:...:..:|......   .|:....|..||.| :...:|.:.:..|
  Rat   199 NGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR-WVPTLRSVCLIGD 262

  Fly   292 EEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSD 356
            :|:..                                     |.|.|                  
  Rat   263 KEQRA-------------------------------------AFVRD------------------ 272

  Fly   357 EEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLV 421
                             |:.|    .:|                                  |:.
  Rat   273 -----------------VLLP----GEW----------------------------------DVC 282

  Fly   422 ITSYNLVVNE---LKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTP 483
            :|||.:::.|   .|::.         |..:::||||.|:|.|:.....|.:.:......|||||
  Rat   283 VTSYEMLIKEKSVFKKFN---------WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 338

  Fly   484 VQNRGVDVFALLRFVNVPNF----QDLQQWKKNLNESMLGHR----RLNFIIKPLMLRRTKQKLQ 540
            :||...::::||.|: :|:.    .|...|....|  .||.:    ||:.:::|.:|||.|..::
  Rat   339 LQNNLHELWSLLNFL-LPDVFNSADDFDSWFDTNN--CLGDQKLVERLHMVLRPFLLRRIKADVE 400

  Fly   541 ASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFI 605
            .|     ||           .|.|:.:|..||.:.::.:|:.|::      |::..:       .
  Rat   401 KS-----LP-----------PKKEVKIYVGLSKMQREWYTRILMK------DIDILN-------S 436

  Fly   606 AGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQN 670
            ||.|...|                        :|.:|::||:.|.||.|..|             
  Rat   437 AGKMDKMR------------------------LLNILMQLRKCCNHPYLFDG------------- 464

  Fly   671 VKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGD 735
                                                                  .|...|:.:..
  Rat   465 ------------------------------------------------------AEPGPPYTTDM 475

  Fly   736 DLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVI-DKLEELLTGTNDKIIVTSQWVSY 799
            .|.|.|.                              |||: |||...|.....::::.||....
  Rat   476 HLVTNSG------------------------------KMVVLDKLLPKLKEQGSRVLIFSQMTRV 510

  Fly   800 LAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFN-ANNEKRVLLLSLTAGGVGLNLNVANHMLI 863
            |.|:.......::|....:||....||:..:..:| .|:.|.|.:||..|||:|:||..|:.:::
  Rat   511 LDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 575

  Fly   864 VDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTK 928
            .|..||||::.||.||.:|.||||...::|::..:|||:||....:.||.:..:|: ::|    :
  Rat   576 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVI-QQG----R 635

  Fly   929 CVGGGLNLAELKKLFEM 945
            .|...||.....::.:|
  Rat   636 LVDQNLNKIGKDEMLQM 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 173/834 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 71/378 (19%)
Smarca5NP_001424549.1 None

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