DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and F54E12.2

DIOPT Version :9

Sequence 1:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_502137.1 Gene:F54E12.2 / 178054 WormBaseID:WBGene00010061 Length:1091 Species:Caenorhabditis elegans


Alignment Length:1024 Identity:268/1024 - (26%)
Similarity:428/1024 - (41%) Gaps:282/1024 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TTEIHKQSCSIQ-DQSSV----PVPDSSGEINNWMEPEP----VDSLELSGEYADNESAIFVSAS 64
            :.|..|...:|. |.|.:    ||..:|..     .|||    :.:..::.|||.      :|..
 Worm   256 SNEKRKSGIAINLDDSDIIDVTPVKTTSSR-----PPEPQRPRLPTSPINSEYAK------LSYK 309

  Fly    65 EYNEKKAQIDQLVQKILTME-------QQQRQLEENASETKELCDLKLHLEKLNARLEALGEFLD 122
            |...||.::..|:...|.:.       :|.::|::.....||:               .|.|  :
 Worm   310 ELLAKKNKVMGLISLSLDLPDGGRRVIKQFQELDDEVERRKEM---------------GLAE--E 357

  Fly   123 TLRLREDQQEIKIEDNS-------------------------ELVD--HTEQPKWSNLYSGLNRY 160
            .:...||.:...|||:.                         .:||  ...||.::.:....|:.
 Worm   358 IVDDDEDDEIFVIEDDEPSHRQVAPKFPSGSVMTQNGLLPKRHIVDPLKAPQPDFNAMLEKDNKK 422

  Fly   161 RQKANHTAAQFYQHKSNIIDS-LKTLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRE 224
            ......|..: |:....:.|. ::.|.|.....|...:|...|....:.|:.||::.|.||::||
 Worm   423 MMSGKMTDEK-YKRIQLVSDRVVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLTWMRWRE 486

  Fly   225 RQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMF 289
            .|...|||||||||||||||||:||...:..:..:||:                           
 Worm   487 TQPQPGGILADDMGLGKTLSMISLIAHQKAARRARRED--------------------------- 524

  Fly   290 DDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFS 354
                                              .:||.|...:.||:::               
 Worm   525 ----------------------------------GNDDKDKEKRKVVKEQ--------------- 540

  Fly   355 SDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNR-HEIGIEAFRSY 418
                      |..||..||:|.|.|::.||..|:..::..:.:....|||..: .:|.......|
 Worm   541 ----------GLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQRDIDARRLARY 595

  Fly   419 DLVITSYNLVVNEL--------------------------KRYG-NTSPLFAVYWNRVILDEAHI 456
            |:|||::||:.|||                          :..| :.|.|..:.|:||||||||.
 Worm   596 DVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDSVLAQICWSRVILDEAHT 660

  Fly   457 IRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESMLGHR 521
            |:|.::....:||:|.|...|.|:|||:.|...|:::|:||:.:..|.|.:.||    ||::..:
 Worm   661 IKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLRIRPFSDDKYWK----ESIMPMK 721

  Fly   522 -----RLNFIIKPLMLRRTKQKLQA--SGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIF 579
                 |:|.:.|.|:|||||.:..|  :..:..||...:|:..::|...|...|:|:...:|| |
 Worm   722 PIMADRVNLLTKNLLLRRTKDQTCAVTNQKLVQLPPKNVEVHELELDGDEAQAYEIMMEAAKK-F 785

  Fly   580 TQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILG------IYI 638
            .:.|||   .::|:..:.........||     :..|:...|    .:.|.:...|      ..:
 Worm   786 VKKLLQ---DSNDMKNHGFIPRRNRRAG-----KEGEVQNPF----NFGPRDLAAGSNFEKMSCV 838

  Fly   639 LVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCC 703
            |:|||||||.|.|..:       ..|..|:....:...|...:..:|.|.||             
 Worm   839 LMLLLRLRQACVHFNI-------TKTGVDMDAFSLIGGDNAEEANVDDLNEL------------- 883

  Fly   704 DEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARA-LKLLNPQNPIFQFIR 767
                         ||      |..|:...:||:        ::.|..|| .::.:|     .:: 
 Worm   884 -------------LE------KTMNMTLGNGDN--------EERDKPRATTRIFDP-----DYL- 915

  Fly   768 PSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRD 832
             |.|:|..::.:|.::. ..:|:::.|||.|.|.::...::...::.....||:..|:|:..:..
 Worm   916 -SCKIKNTLEIVENIME-KKEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDS 978

  Fly   833 FNANNEK---RVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRY 894
            |  |.||   ||:||||.||||||||...||:::|||||||.||:||.|||||.||.|..||:|.
 Worm   979 F--NREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRL 1041

  Fly   895 MCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKLF 943
            :.:.|:|||:..||..|:.:|..||   .|..|:.: ..|..|::|.||
 Worm  1042 VTKGTIEQRVVMLQKDKVALASSVL---DGNATRKM-NKLTTADIKMLF 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_001246974.1 HepA <90..945 CDD:223627 247/927 (27%)
DEAD-like_helicase_N 209..534 CDD:421690 99/357 (28%)
F54E12.2NP_502137.1 SNF2_N 474..851 CDD:278600 132/479 (28%)
DEXDc 492..687 CDD:238005 72/280 (26%)
HELICc 916..1038 CDD:238034 53/124 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I1885
eggNOG 1 0.900 - - E1_COG0141
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 395 1.000 Inparanoid score I1119
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132523at2759
OrthoFinder 1 1.000 - - FOG0000507
OrthoInspector 1 1.000 - - mtm4832
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45626
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2250
SonicParanoid 1 1.000 - - X1278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.000

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