DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and swsn-4

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_502082.1 Gene:swsn-4 / 178015 WormBaseID:WBGene00004204 Length:1474 Species:Caenorhabditis elegans


Alignment Length:952 Identity:198/952 - (20%)
Similarity:335/952 - (35%) Gaps:352/952 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LELSGEYADNESAIFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKELC-DLKLHLEK 109
            |:.:.||.|:..::........:||.:.|:.::|...|:::.|......|..|.|. |.....|:
 Worm   366 LQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEARVHVRERSTGKALTGDQAPKTEE 430

  Fly   110 LNARLEALGEF--LDTLRLREDQQEIKIEDNSELVDHTEQPKWSNLYSGL--------------- 157
            :...||...|:  :...:|.:|::|   |:....|:..|:.  .:.|:|:               
 Worm   431 IEFWLETHPEYEIVPRDQLSDDEEE---EEEEAPVEPEEEK--DDQYAGMDEETKAKMILEKARN 490

  Fly   158 --NRYRQKANHTAAQFY--QHKSNIIDSLKTLYEPIQPRPAIDDLEKQ--------PALLLVRLL 210
              :.|.||.....|.:|  .||..                  :.:.||        |.||   |.
 Worm   491 EEDEYDQKTKKQMADYYATAHKIK------------------EKVVKQHTTMGGGDPNLL---LK 534

  Fly   211 KHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEF 275
            .:|...|:||.......:: |||||:||||||:..|:|:                          
 Worm   535 PYQIKGLEWMVSLYNNNLN-GILADEMGLGKTIQTISLV-------------------------- 572

  Fly   276 NRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQ 340
              .|..|:::                                                       
 Worm   573 --TYLMEVKQ------------------------------------------------------- 580

  Fly   341 KDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGP 405
                                  :||.|     ||:.|:|.:..|.:|.|....  ::..:.:.|.
 Worm   581 ----------------------NNGPY-----LVIVPLSTLSNWQNEFAKWAP--SVTTIIYKGT 616

  Fly   406 NRHEIGIEA-FR--SYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNS 467
            ......:|. .|  ::::::|:|..|:.|....|.      :.|..:|:||.|.::|..   |..
 Worm   617 KDARRRVEGQIRKGAFNVLMTTYEYVIKEKALLGK------IRWKYMIIDEGHRLKNHN---CKL 672

  Fly   468 VCQLRAHCH----WALTGTPVQNRGVDVFALLRFVNVPNFQD---LQQW----------KKNLN- 514
            ...|....|    ..|||||:||:..:::|||.|:....|..   .:||          |..|| 
 Worm   673 TLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQ 737

  Fly   515 -ESMLGHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKI 578
             |:||..|||:.:::|.:|||.|:::::.     ||           .|||..:....||:.|.|
 Worm   738 EETMLIIRRLHKVLRPFLLRRLKKEVESQ-----LP-----------DKTEYVIKCDQSALQKVI 786

  Fly   579 FTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLL 643
                                               |..:.:..|.....:.|.:.|    :..::
 Worm   787 -----------------------------------YRHMQKGLLLDAKMSSGARSL----MNTVV 812

  Fly   644 RLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDS 708
            .||:.|.||.|.             .|:                                  |||
 Worm   813 HLRKLCNHPFLF-------------PNI----------------------------------EDS 830

  Fly   709 TRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLK 773
            .|  ..:|:..:            :|.||                            :|.:.||:
 Worm   831 CR--AYWKVNEV------------NGTDL----------------------------MRVAGKLE 853

  Fly   774 MVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNA-NN 837
            : :|::...|..|..:|::..|..|.:.|....|....:..|..:|.....||..:|..||| |:
 Worm   854 L-LDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNS 917

  Fly   838 EKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQ 902
            :..:.:||..|||:||||..|:.::|.|..|||..:.|||||.:|.||.|...:.|.:..::||:
 Worm   918 DLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEE 982

  Fly   903 RIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKLFE 944
            :|.:....||.:.:.|:  :.|:..:...|    ||.|::.|
 Worm   983 KILAAARYKLNVDEKVI--QAGKFDQRSTG----AERKQMLE 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 176/857 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 72/346 (21%)
swsn-4NP_502082.1 QLQ 88..116 CDD:462622
HSA 272..344 CDD:214727
BRK 403..446 CDD:462196 10/42 (24%)
PLN03142 472..1288 CDD:215601 174/841 (21%)
Blue background indicates that the domain is not in the aligned region.

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