DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and rad-54.L

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_492438.1 Gene:rad-54.L / 172728 WormBaseID:WBGene00004298 Length:818 Species:Caenorhabditis elegans


Alignment Length:791 Identity:148/791 - (18%)
Similarity:261/791 - (32%) Gaps:328/791 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 LLKHQQSCLKWM----------QFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEK 263
            |..||:..:|:|          :|.      |.|:||:|||||||..|:|:              
 Worm   202 LRPHQRDGVKFMWDCVTGINIPEFH------GCIMADEMGLGKTLQCISLL-------------- 246

  Fly   264 KKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDN 328
                   ||                                                        
 Worm   247 -------WT-------------------------------------------------------- 248

  Fly   329 DAGDKAVVEDEQKDLLAKTPE--PEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASK 391
                          ||.::|:  |.|                 :.:::|||.|::..|..|: .|
 Worm   249 --------------LLRQSPDACPTV-----------------SKSIIVCPSSLVKNWDKEI-KK 281

  Fly   392 VAQNAIRVLTFHGPNRHEIGIEAFRSY----------DLVITSYNLVVNELKRYGNTSPLFAVYW 446
            .....:..:......|.:| |....|:          .::|.||.              .|.:|.
 Worm   282 WLGTRLNAMPVDSGKREQI-IACLNSFMADSKMRCAIPVLIISYE--------------TFRLYA 331

  Fly   447 N--------RVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNF 503
            |        .||.||.|.::||:.....::..|:......::|||:||..::.|:|:.|||....
 Worm   332 NILHSGDVGIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLL 396

  Fly   504 QDLQQWKKNLNESMLGHR-----------------RLNFIIKPLMLRRTKQKLQASGDMPALPSL 551
            ....:::|....::|..|                 .:..:::..::|||...|     ...||..
 Worm   397 GTASEFRKKFENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALL-----TKYLPVK 456

  Fly   552 KIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNE 616
            ...:||.:.|..:..:|..|                                     :..|:.|.
 Worm   457 YEHIICCKNSTLQETLYNKL-------------------------------------IECEKQNR 484

  Fly   617 IYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQ 681
            |.|:          :|......|..:..|::.|.||.|:                          
 Worm   485 IVEK----------DKGATASALSFITHLKKLCNHPYLV-------------------------- 513

  Fly   682 LKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQ 746
                    .|:|.:.|:            |..|..|.:..:                   ||   
 Worm   514 --------YDEFQKPDN------------RFRNKCLSIFPE-------------------SF--- 536

  Fly   747 LDSARALKLLNPQ--NPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWV----SYLAIVRK 805
                      ||:  :|.|     |.|:|::...|......|:||.::.|.:.    .::.:.:.
 Worm   537 ----------NPKSFDPSF-----SGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKL 586

  Fly   806 RLQDLSWETLDFNGQLTAKEREIVLRDFN-ANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWN 869
            |    .::.:..:|.::.|:|..::..|| ..:.....|||..|||.||||..||.:::.|..||
 Worm   587 R----GYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWN 647

  Fly   870 PQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGL 934
            |..:.||..|::|.||.|..||||.:...::|:::...|..|..::..|: :.|.:|.:    ..
 Worm   648 PANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVV-DAGEDVAR----HF 707

  Fly   935 NLAELKKLFEM 945
            :..:|::||::
 Worm   708 SSEQLRELFKL 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 142/763 (19%)
DEAD-like_helicase_N 209..534 CDD:475120 64/371 (17%)
rad-54.LNP_492438.1 HepA <202..698 CDD:440319 143/765 (19%)
DEAD-like_helicase_N 202..444 CDD:475120 64/371 (17%)

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