DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and Chd9

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001297459.1 Gene:Chd9 / 109151 MGIID:1924001 Length:2885 Species:Mus musculus


Alignment Length:1066 Identity:215/1066 - (20%)
Similarity:391/1066 - (36%) Gaps:309/1066 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SPSDTTEIHKQS----CSIQDQSSVPVPDSSG--------EINNWMEPEPVDSLELSGEYADNES 57
            ||..|...|..|    |..:...|....|.||        ::....|.:|...:|...:   .|.
Mouse   463 SPLSTNHQHLHSRNHLCLQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKPRKRVESESK---QEK 524

  Fly    58 AIFVSASEYNEKKAQIDQLVQKILTME---------QQQRQLEENASETKELCDLKLHLEKLNAR 113
            |..:.:......|.:.::.:.::::.|         :::::.....|:.|:..:.|   .|..::
Mouse   525 ANRIISEAIARAKERGERNIPRVMSPENFPSASVEGKEEKRGRRMKSKPKDRDNKK---PKTYSK 586

  Fly   114 LE---ALGEFLDTL---RLREDQQEIKIEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFY 172
            |:   .:|:.:.||   ..|.::...::.|..:...||.:.:.|.......:.::|.....|:..
Mouse   587 LKEKTKIGKLIITLGKKHKRRNESSDELSDAEQRSQHTFKEQHSQKRRSNRQIKRKKYAEDAEGK 651

  Fly   173 QHKSNIIDSLKTLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCL--KWMQFRE-RQKISGGILA 234
            |.:..:..||:.......| |.     :||..|.|.....:.:.:  |.:..|. ::::|.|::.
Mouse   652 QSEEEVKGSLRVKRNSAPP-PG-----EQPLQLFVENPSEEDAAIVDKILACRTVKKEVSPGVML 710

  Fly   235 DDMGL---GKTLSMIALILASEE--TKNRKREEKKKALTLKWTQE-----------FNRVYCKEI 283
            |....   .|..|.:....|:|:  .|:::.::|.|...|:..|.           ||..|.:..
Mouse   711 DIEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVD 775

  Fly   284 RKISM-FDDEEESGKEEEQY------EPPEKRTCHVK----TKKINQFRILDDDDNDAG--DKAV 335
            |.:.: |.:::::|:....|      .|.|..|..:|    ..||.:|..|.....|..  |:  
Mouse   776 RILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDR-- 838

  Fly   336 VEDEQKDLLAKTPEPEVFSSDEEEEHLSNGR-----------------YPSANT----------- 372
                        |...::...|:.....||.                 |...|.           
Mouse   839 ------------PPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKT 891

  Fly   373 -------------------LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGP-------NRHEIG 411
                               |::.|:|.:..|..|..:   ...|.|:.:||.       .::|:.
Mouse   892 IQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRT---WTDINVVVYHGSLISRQMIQQYEMY 953

  Fly   412 IE---------AFRSYDLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNS 467
            ..         |:| :..:||::.:::      |....|.|:.|..||:||||.::|........
Mouse   954 FRDSQGRIIRGAYR-FQAIITTFEMIL------GGCGELNAIDWRCVIIDEAHRLKNKNCKLLEG 1011

  Fly   468 VCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQD----LQQWKKNLNESMLGHRRLNFIIK 528
            :..:.......|||||:||...::|:||.|:....|..    :|::.....|..:  ::|..|:|
Mouse  1012 LKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQV--QKLQAILK 1074

  Fly   529 PLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDL 593
            |:||||.|:.::..     |...:..:|.|:|:..:...|:   ||.:|.|: ||   .||....
Mouse  1075 PMMLRRLKEDVEKK-----LAPKEETIIEVELTNIQKKYYR---AILEKNFS-FL---SKGAGQT 1127

  Fly   594 NYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGM 658
            |..:|..|                                        ::.||:.|.||.|:.| 
Mouse  1128 NVPNLVNT----------------------------------------MMELRKCCNHPYLIKG- 1151

  Fly   659 LRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDE 723
                  ||:    |:                |.:|.:|.:                         
Mouse  1152 ------AEE----KI----------------LGEFRDTYN------------------------- 1165

  Fly   724 IKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTND 788
                          |:||.|..|                 ..|:.:.|| ::||||...:.....
Mouse  1166 --------------PSASDFHLQ-----------------AMIQSAGKL-VLIDKLLPKMKAGGH 1198

  Fly   789 KIIVTSQWVSYLAIVRKRL--QDLSWETLDFNGQLTAKEREIVLRDFN-ANNEKRVLLLSLTAGG 850
            |:::.||.|..|.|:...|  :...:|.:|  |::....|:..:..|: .::::.|.||...|||
Mouse  1199 KVLIFSQMVRCLDILEDYLIHKRYLYERID--GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 1261

  Fly   851 VGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIA 915
            :|:||..|:..:|.|..||||.:.|||.|.:|.||.|...:||.:.:::.|:.:......||.:.
Mouse  1262 LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLD 1326

  Fly   916 KVVLPEEGGEVTKCVGGGLNLAELKK 941
            |.||....|..:...|    :.:|.|
Mouse  1327 KAVLQSMSGRDSNVSG----IQQLSK 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 188/913 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 82/423 (19%)
Chd9NP_001297459.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..195
KLF3_N 219..360 CDD:410554
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..263
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..347
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..677 34/209 (16%)
PTZ00121 <510..>765 CDD:173412 44/266 (17%)
CD1_tandem_CHD5-9_like 685..749 CDD:349315 12/63 (19%)
CD2_tandem_CHD5-9_like 769..827 CDD:349310 12/57 (21%)
PLN03142 858..>1479 CDD:215601 139/645 (22%)
DEXHc_CHD9 859..1080 CDD:350819 47/232 (20%)
LXXLL motif 1 867..871 0/3 (0%)
DEAH box 996..999 2/2 (100%)
LXXLL motif 2 1035..1039 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1460..1484
LXXLL motif 3 2030..2034
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2046..2238
Binds A/T-rich DNA. /evidence=ECO:0000250 2331..2471
A.T hook-like 2428..2435
BRK 2472..2512 CDD:462196
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2473..2494
BRK 2546..2590 CDD:197800
LXXLL motif 4 2710..2714
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2724..2770
LXXLL motif 5 2782..2786
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2818..2885
Blue background indicates that the domain is not in the aligned region.

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