DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and chd8

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_012812626.1 Gene:chd8 / 100192376 XenbaseID:XB-GENE-966847 Length:2335 Species:Xenopus tropicalis


Alignment Length:970 Identity:210/970 - (21%)
Similarity:331/970 - (34%) Gaps:370/970 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VPVPDSSGEINNWMEPEPVDSLELSGEYADNESAI-------------------FVSASEYNEKK 70
            :|:|||          |.|.|::...|....|.|.                   :|...||..|.
 Frog   562 MPLPDS----------EAVPSMQFFVENPSEEDAAIVDKILSMRLAKKELPTGEYVEVEEYFVKY 616

  Fly    71 AQIDQLVQKILTMEQQQRQLEENASETKELCDLKLH--LEKLNARLEALGEFL--DTLRLREDQQ 131
            .....|..:..|:||.:|             |.::|  |::...::..:..||  |......|..
 Frog   617 KNYSYLHCEWATIEQLER-------------DKRIHQKLKRFKTKMTQMQHFLQEDEESFNPDYV 668

  Fly   132 EI-KIEDNSELVDHTE-QP------KWSNLYSGLNRYRQKANHTAAQFYQHKSNI----IDSLKT 184
            |: :|.|.|...|... :|      ||.:|     .|....       ::.|.::    |:..|.
 Frog   669 EVDRILDESHSTDKDNGEPVVYYLVKWCSL-----PYEDST-------WELKEDVDDGKIEEFKR 721

  Fly   185 LYEPIQP------RPAIDDLEKQPALLLVR-------LLKHQQSCLKWMQFR--ERQKISGGILA 234
            : |..||      |||....:|   |.|.|       |.::|...:.|:.|.  .||..   |||
 Frog   722 I-EARQPNLKRVARPAATSWKK---LELSREYQNGNQLREYQLEGVNWLLFNWYNRQNC---ILA 779

  Fly   235 DDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEE 299
            |:||||||:..|..:                       ||   ||...||               
 Frog   780 DEMGLGKTIQSITFL-----------------------QE---VYNVGIR--------------- 803

  Fly   300 EQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSN 364
                                                                             
 Frog   804 ----------------------------------------------------------------- 803

  Fly   365 GRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSY----------- 418
            |.:     ||:.|:|.:..|..|..|....|.|   .:||.......|:.:..|           
 Frog   804 GPF-----LVIAPLSTITNWEREFGSWTQMNTI---VYHGSLASRQMIQQYEMYCKDSKGRLIPG 860

  Fly   419 ----DLVITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWAL 479
                |.:||::.:|:::...      |..:.|..||:||||.::|......:|:..:.......|
 Frog   861 AYKFDALITTFEMVLSDCPE------LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLL 919

  Fly   480 TGTPVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESMLGH--RRLNFIIKPLMLRRTKQKLQAS 542
            ||||:||...::|:||.|:....|....::.|:..:.....  ::|..|:||:||||.|:.::.:
 Frog   920 TGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN 984

  Fly   543 GDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAG 607
                 |...:..:|.|:|:..:...|:   ||.:|.|: ||   .||.|..|      ||.    
 Frog   985 -----LAPKQETIIEVELTNIQKKYYR---AILEKNFS-FL---TKGASQSN------TPN---- 1027

  Fly   608 HMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVK 672
                                          :|..::.||:.|.||.|:.|               
 Frog  1028 ------------------------------LLNTMMELRKCCNHPYLITG--------------- 1047

  Fly   673 VDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDL 737
                           ||                            |.|..|.:|           
 Frog  1048 ---------------AE----------------------------EKIISEFRE----------- 1058

  Fly   738 PTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAI 802
                          |..::.|...:...:|.|.|| ::||||...|.....|:::.||.|..|.|
 Frog  1059 --------------ATPVVPPDFHVQAMVRSSGKL-VLIDKLLPKLRAGGHKVLIFSQMVRCLDI 1108

  Fly   803 VRKRL--QDLSWETLDFNGQLTAKEREIVLRDFN-ANNEKRVLLLSLTAGGVGLNLNVANHMLIV 864
            :...|  :...:|.:|  |::....|:..:..|: .::::.|.||...|||:|:||..|:..:|.
 Frog  1109 LEDYLIQRRYLYERID--GRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIF 1171

  Fly   865 DLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGG 924
            |..||||.:.|||.|.:|.||:|...|||.:.:::.|:.:......||.:.|.||....|
 Frog  1172 DSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 185/854 (22%)
DEAD-like_helicase_N 209..534 CDD:475120 70/343 (20%)
chd8XP_012812626.1 Med15 35..>363 CDD:312941
CD1_tandem_CHD5-9_like 582..647 CDD:349315 14/77 (18%)
CD2_tandem_CHD5-9_like 665..723 CDD:349310 14/70 (20%)
PLN03142 754..>1357 CDD:215601 161/739 (22%)
DEXHc_CHD8 755..976 CDD:350818 70/343 (20%)
BRK 2122..2165 CDD:462196
Blue background indicates that the domain is not in the aligned region.

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