DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2678 and zf30C

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:645 Identity:126/645 - (19%)
Similarity:183/645 - (28%) Gaps:247/645 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CRTC--------------MDETGTLVDIFANVRDPVLDE--------PEMSLSHILARCTERPVK 51
            ||.|              .||.|....:....|.|.:.|        .|....|...:|.|..:.
  Fly    61 CRHCDARFCHEEELTQHAKDEHGVTGAVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLP 125

  Fly    52 RGDLLPQFICVSCVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPE---------NQVHLAACNGD 107
            |.:..| ..|..|..      ||...|..| :|.....:..|.||         .:.|.|....|
  Fly   126 REESRP-MECKCCYT------RFSSASNLS-KHRRSRPDTCGQPEYDSPGSSDGMKKHKAFRKKD 182

  Fly   108 KNQIINQ---------------------KMQLKSDRQ---------------------------- 123
            :|:..:.                     |.:||.:.|                            
  Fly   183 RNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPNNSEDDADASGFQLP 247

  Fly   124 -----------------QDTQQMTKTQKPDDDLSQK-QTLQAKLQEGNIDGPPESFTLH------ 164
                             ||.....||:..|...::| :.|...|.||:...|.||..:.      
  Fly   248 PPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGIL 312

  Fly   165 -----------------------------PRKRTCRTEEQ------------------------- 175
                                         ||||....:|:                         
  Fly   313 DEIAAVPLVEVAEEDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGT 377

  Fly   176 ----ADMIPKEATRSTKMICDADGYYNCPHCSKRFCSQTQLRTHITD--LCN------------- 221
                |.:..||.....|||...:..:.||||.|.:..:.....|:.|  ..|             
  Fly   378 PKRVAKISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDV 442

  Fly   222 ---------RCPYCPRTYMQKSNLKRHLRNH--LSKPAHKC-FHCSKAFMRKDHLKRHLRTHDSD 274
                     :||.|.:.|:.:..|..|::.|  ..|...|| .:|:..|..|:....|.|....:
  Fly   443 HAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKE 507

  Fly   275 GPLSCSQCSAVFIEHVQLEIHRREHKQRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCS 339
             .|.|.:|......|..|:.|.|..         .|.|:|.|...:...|...|    .|.|..|
  Fly   508 -LLYCEKCDKYMTGHDSLKNHERNF---------HSKKEPRSQQRNLICDKCGK----KFTGRTS 558

  Fly   340 IPPMLK------PKPICDICQKKFSSVYALKRHMLTHNR-------------------QHHLK-- 377
            :...::      |...|.:|.|..|:...||.|||.|..                   :.|||  
  Fly   559 LSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTR 623

  Fly   378 -------KCTYCSEEFKTEKHLKRHERGHMG-DLFRCEFCSLVFVDVNYLRKHKKRIHSN 429
                   ||..|.:|:...:.|..|...|.| ..|.|..|...|..::.|:.|:| :|::
  Fly   624 HTDYKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRK-VHAD 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871 21/97 (22%)
COG5048 220..>284 CDD:227381 19/88 (22%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
zf-C2H2 249..271 CDD:278523 7/22 (32%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 379..399 CDD:275368 5/19 (26%)
C2H2 Zn finger 406..427 CDD:275368 6/20 (30%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368 4/20 (20%)
C2H2 Zn finger 98..117 CDD:275368 3/18 (17%)
C2H2 Zn finger 134..152 CDD:275368 7/24 (29%)
C2H2 Zn finger 511..532 CDD:275370 6/29 (21%)
COG5048 <523..>672 CDD:227381 38/161 (24%)
C2H2 Zn finger 546..566 CDD:275368 5/23 (22%)
C2H2 Zn finger 575..595 CDD:275368 9/19 (47%)
C2H2 Zn finger 603..624 CDD:275368 3/20 (15%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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