DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kipf and Paris

DIOPT Version :10

Sequence 1:NP_649750.1 Gene:kipf / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:430 Identity:110/430 - (25%)
Similarity:177/430 - (41%) Gaps:98/430 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VCRTCMDETGTLVDIFANVRDPVLDEPEMSLSHILARCTERPVKRGDLLPQFICVSCVLAVQNAF 72
            :||.|||.:|.||:||...|     ...:|::.::|:||...||||||..:.||..|...|::|:
  Fly     4 ICRVCMDISGKLVNIFDARR-----RTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAY 63

  Fly    73 RFKWQSEQSYQHFFRVLNQSGAPENQVHLAACNGDKNQIINQKMQLKSDRQQDTQQMTKTQKPDD 137
            ..:...|:|:|.:.||.::.      :..|.|    ..:..:..::..|   :..::......||
  Fly    64 GIRQTCEESHQFYCRVRDEG------IEDALC----ALLEEEDWEISED---EDARIDSASAADD 115

  Fly   138 DLSQKQTLQAKLQEGNIDGPPESFTLHPRKRTCRTEEQADMIPKEATRSTKMICDADGY-YNCPH 201
            |             |..|....:|..    |.|..:.|     ::.|....|....||. :.||:
  Fly   116 D-------------GKSDSKKVAFEC----RECHKKYQ-----RKGTFLRHMRTHMDGQSFPCPY 158

  Fly   202 CSKRF----CSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNHLSKPAHKCFHCSKAFMRKD 262
            |.:.|    ..:..::||.......|.:|.:|:.|:|.|:.|.|.|..:...||..|||.|::..
  Fly   159 CKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSS 223

  Fly   263 HLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREHK-QRPGSSKSESTKDPDSDDSDQAQDLK 326
            .|:||:|||.|:.|..||:|:..|.....|:.|.|.|. :||..                     
  Fly   224 DLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFK--------------------- 267

  Fly   327 PKWTKNTFNGTCSIPPMLKPKPICDICQKKFSSVYALKRHMLTHNRQH---HLKKCTYCSEEFKT 388
                                   |..|.|.|    |:|:|:..|:|.|   ...:|::|.:.|:.
  Fly   268 -----------------------CSHCPKAF----AMKQHLKQHSRLHLPDRPFRCSHCPKTFRL 305

  Fly   389 EKHLKRHERGHMGD-LFRCEFCSLVFVDVNYLRKHKKRIH 427
            ...||.|:..|..: .|:|..|:..:.....|.:|...||
  Fly   306 SSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARHILEIH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kipfNP_649750.1 zf-AD 8..75 CDD:462262 26/66 (39%)
COG5048 220..>284 CDD:227381 26/63 (41%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..427 CDD:275368 4/20 (20%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262 29/78 (37%)
C2H2 Zn finger 128..148 CDD:275368 5/28 (18%)
C2H2 Zn finger 156..176 CDD:275368 4/19 (21%)
COG5048 <180..341 CDD:227381 54/208 (26%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
C2H2 Zn finger 212..232 CDD:275368 9/19 (47%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 9/23 (39%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..341 CDD:275368 3/16 (19%)

Return to query results.
Submit another query.