DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2678 and CG44002

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:422 Identity:104/422 - (24%)
Similarity:162/422 - (38%) Gaps:125/422 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KNVCRTCMDETGTLVDIFANVRD-PVLDEPEMSLSHILARCTERPVKRGDLLPQFICVSCVLAVQ 69
            :|.||.|:..:..:|:||...:| ||      |::|::..||...|::||.||..||..||....
  Fly     2 ENKCRVCLASSKNMVNIFEERQDLPV------SIAHMIIECTGFKVEKGDSLPHSICPPCVKDAH 60

  Fly    70 NAFRFKWQSEQSYQHFFR----VLNQSGAPENQVHLAACNGDKNQII-----NQKMQLKSDR--- 122
            |||......|:|||.|:.    ||.:..:.:..:.|:    |.:::|     .:|:.|..::   
  Fly    61 NAFTIIKTYERSYQVFYEVQDTVLEEELSEDVIIELS----DSDEVILIDEQEEKVHLSENKAPT 121

  Fly   123 -QQDTQQMTKTQKPDDDLSQKQTLQAK---------------LQEGNIDGP-PESFTL-HPRKRT 169
             :..||:.:||.:.|:....|..:..:               |:....||| |.|.|. |..|..
  Fly   122 NEVSTQEESKTAQSDNVSEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSEHAVKEE 186

  Fly   170 CRTEEQADMIPKEATRSTKMICDADGYYNCPHCSKRFCSQTQLRTHITDLCNRCPYCPRTYMQKS 234
            .||  :|..:.:.:|            :.|..|:|.|||                        |:
  Fly   187 LRT--KARQLSRNST------------HTCRLCNKTFCS------------------------KA 213

  Fly   235 NLKRHLRNHLSKPAHKCFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREH 299
            :..||.:.|..:....|..|.|.|.....:|||||||..:.|..|..|.:.|.:...|..|.|.|
  Fly   214 SCVRHQKTHTGEKPFACEICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQHIRIH 278

  Fly   300 K-QRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCSIPPMLKPKPICDICQKKFSSVYAL 363
            . :||..                                            ||:|.|.|......
  Fly   279 TGERPYK--------------------------------------------CDMCDKFFRERSDA 299

  Fly   364 KRHMLTHNRQHHLKKCTYCSEEFKTEKHLKRH 395
            ::||::|..:... ||:.|...|:..|.|:||
  Fly   300 RKHMMSHTAEKRF-KCSQCERRFRQPKGLRRH 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871 29/77 (38%)
COG5048 220..>284 CDD:227381 18/63 (29%)
C2H2 Zn finger 223..243 CDD:275368 3/19 (16%)
zf-C2H2 249..271 CDD:278523 9/21 (43%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 379..399 CDD:275368 7/17 (41%)
C2H2 Zn finger 406..427 CDD:275368
CG44002NP_608754.1 zf-AD 5..78 CDD:285071 30/78 (38%)
C2H2 Zn finger 146..166 CDD:275368 1/19 (5%)
COG5048 <162..302 CDD:227381 49/221 (22%)
C2H2 Zn finger 202..222 CDD:275368 9/43 (21%)
zf-H2C2_2 217..238 CDD:290200 6/20 (30%)
C2H2 Zn finger 230..250 CDD:275368 9/19 (47%)
zf-H2C2_2 242..266 CDD:290200 10/23 (43%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
zf-H2C2_2 270..293 CDD:290200 10/66 (15%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..333 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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