DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2678 and CG43347

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster


Alignment Length:443 Identity:89/443 - (20%)
Similarity:142/443 - (32%) Gaps:175/443 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 QLKSDRQQDTQQMTKTQKPDDD--------------LSQKQTLQAK----LQEGNIDGPPESFTL 163
            :||:|.|:..::.:..|:.:||              .||...|:.|    ..|.::   |..|.|
  Fly   976 KLKADAQRQAKRASGRQRHEDDDMEDMEDMDMDMDESSQLSELETKPLITFAEASV---PAEFEL 1037

  Fly   164 HPRKRT-----CRTEEQA---------------------------DMIPKEATRSTKMIC----- 191
            |..:..     .|||.:|                           :|....|.:|..:.|     
  Fly  1038 HNVEPNVTGVFARTEVRAFTKLGPLIGQPVQTGEVREGSDMKWIFEMCEAGADKSYLLCCDNPNA 1102

  Fly   192 -----------------------DADGYY-------------------------------NCPHC 202
                                   |...|:                               ||..|
  Fly  1103 SNWLRFVRPAPSYEERNVNLVSIDRQAYFVSCRDLRNGMELLYWSDDCNTMWRKKHTEKTNCGGC 1167

  Fly   203 SKRFCSQTQLRTH----------ITDLCNRCPYCPRTYMQKSNLKRH-LRNHLSKPAHKCFHCSK 256
            :.:|......|||          :|.....|..|....:.|.|:.:| ...|..|.|::|..|||
  Fly  1168 NLKFEHPLYYRTHCSVFHDPSMSLTIRKYHCKVCGEPVLGKDNIMKHAAEKHDGKGAYQCQFCSK 1232

  Fly   257 AFMRKDHLKRHLRTH------DSDGPLSCSQCSAVFIEHVQLEIH-RREHKQRPGSSKSESTKDP 314
            .|:|.::|:.| ||:      :...|: |..|...|.:..:|:.| :|.|               
  Fly  1233 FFLRLNYLEMH-RTYGCASNPNRSRPV-CDFCGRKFCQPQKLKAHIKRMH--------------- 1280

  Fly   315 DSDDSDQAQDLKPKWTKNTFNGTCSIPPMLKPKPICDICQKKFSSVYALKRHML-THNRQHHLKK 378
             ||.::..:|.:                       |.:|.|...|..||:||.. .|:|...:..
  Fly  1281 -SDMAEVLRDFQ-----------------------CKLCSKLLGSRAALQRHSKEVHSRNSTVVS 1321

  Fly   379 CTYCSEEFKTEKHLKRHERGHMG-DLFRC--EFCSLVFVDVNYLRKHKKRIHS 428
            |..|.:.|:...:||.|...|.| ..|:|  ..|:..|.....|:.|.|::|:
  Fly  1322 CPRCQKLFQNRSNLKIHMLTHSGVRPFKCAEPECNAAFTTKQCLQFHYKKVHN 1374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871
COG5048 220..>284 CDD:227381 21/70 (30%)
C2H2 Zn finger 223..243 CDD:275368 5/20 (25%)
zf-C2H2 249..271 CDD:278523 9/21 (43%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..299 CDD:275368 6/20 (30%)
C2H2 Zn finger 350..370 CDD:275368 8/20 (40%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..427 CDD:275368 6/22 (27%)
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 22/71 (31%)
C2H2 Zn finger 1198..1219 CDD:275368 5/20 (25%)
C2H2 Zn finger 1227..1255 CDD:275368 10/28 (36%)
C2H2 Zn finger 1259..1280 CDD:275368 6/20 (30%)
C2H2 Zn finger 1292..1313 CDD:275368 8/20 (40%)
C2H2 Zn finger 1322..1342 CDD:275368 6/19 (32%)
zf-H2C2_2 1334..1361 CDD:290200 9/26 (35%)
C2H2 Zn finger 1350..1373 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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