DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2678 and M03D4.4

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:378 Identity:86/378 - (22%)
Similarity:135/378 - (35%) Gaps:94/378 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 FRVLNQSGAPENQVHLAACNGDKNQIINQKMQLKSDRQQDTQQ---MTKTQKPDDD-LSQKQTLQ 146
            |..|::....|.:.|.....||:.:          ||.:|...   |.|.:..|.| ||...:.|
 Worm    14 FHSLDELQRHEREEHETVEQGDQEE----------DRMEDDSDELAMIKIKIEDSDFLSDTDSSQ 68

  Fly   147 AKLQEGNIDGPPESFTLHPRKR-TCRTEEQADMIPKEATRSTKM-ICDADGYYNCPHCSKRFCSQ 209
            ..:   |...|.|..:...:.| .|  |:..:|...:...:|.| |...:..::|..|.|.|.::
 Worm    69 LSM---NPTTPSEKSSSGEKGRYEC--EDCHEMFAVKRELATHMRIHSGEQPHSCTQCGKEFGTR 128

  Fly   210 TQLRT----HITDLCNRCPYCPRTYMQKSNLKRHLRNHLSKPAHKCFHCSKAFMRKDHLKRHLRT 270
            ..|:.    |..:..:.||:|.:.:.||.:|.:||..|.....|:|..|.|.|:.|..|.||::.
 Worm   129 QLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHMKI 193

  Fly   271 HDSDGPLSCSQCSAVFIEHVQLEIHRREHKQRP--------------GSSKSESTKDPDSD---D 318
            |...| .||.||...|::.|.|:.|..:.|.:|              |...:.|.|.|...   .
 Worm   194 HQERG-FSCQQCGRSFLKQVMLDEHHLKCKGKPSSPIRSLLTPTMKAGLESAISIKPPQESMILS 257

  Fly   319 SDQAQDLKPKW------------------------------TKNTFNGTC-------SIP-PMLK 345
            |:....:..|.                              ..|..||:.       .|| |.:.
 Worm   258 SETIAKMAQKLLIQQQENHRNALNTLLVKQHENILNNNNNNESNILNGSVMHKDAGFEIPAPTIP 322

  Fly   346 PKPICDICQKKFSSVYALKRHMLTHN-------------RQHHLKKCTYCSEE 385
            ....|.||:.:|:|..:...||..|:             ..||..:.|..|.:
 Worm   323 LSLTCMICKSQFNSQPSFTLHMYMHHIANQNPNLSIDSTHIHHTHQPTTISHQ 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871
COG5048 220..>284 CDD:227381 24/63 (38%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
zf-C2H2 249..271 CDD:278523 9/21 (43%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 379..399 CDD:275368 2/7 (29%)
C2H2 Zn finger 406..427 CDD:275368
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 5/21 (24%)
zf-H2C2_2 102..127 CDD:290200 7/24 (29%)
C2H2 Zn finger 118..138 CDD:275368 5/19 (26%)
C2H2 Zn finger 146..166 CDD:275368 8/19 (42%)
zf-H2C2_2 158..181 CDD:290200 8/22 (36%)
zf-C2H2 172..194 CDD:278523 9/21 (43%)
C2H2 Zn finger 174..194 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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