DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2678 and klf-1

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_497632.1 Gene:klf-1 / 175404 WormBaseID:WBGene00018990 Length:497 Species:Caenorhabditis elegans


Alignment Length:318 Identity:69/318 - (21%)
Similarity:114/318 - (35%) Gaps:83/318 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMHSAKN--VCRTCMDETGTLVDIFANVRDPVLDEPEMSLSHILARCTERPVKRGDLLPQFICV- 62
            ::||..|  :..:...::|........|.|..:|.|       .:.|.:|.....||..:.:.| 
 Worm   243 LIHSTSNFDIASSSSGDSGHQDHESIVVEDADMDSP-------TSPCVKRSAMNFDLRDEPLTVN 300

  Fly    63 -----------SCVLAVQNAFRFKWQSEQSYQ--HFFRVLNQSGAPENQVHLAACNGDKNQIINQ 114
                       |.|.:..|:|.:     |::.  .|.|.:::..|......:...||..:     
 Worm   301 VESVSSTSDLPSSVSSSVNSFVY-----QNFDPLEFKRKIDELTASACLAVMPDANGQVD----- 355

  Fly   115 KMQLKSDRQQDTQQMTKTQKPDDDLSQKQTLQAKLQEGNIDGPPESFTLHPRKRTCRTEEQADMI 179
            .|.:|:......:||.:.|....:.||:..:.:.|::.|.:..|.|                   
 Worm   356 PMAIKTQLDAIKKQMEEHQTHMAEASQRLHVDSSLEDSNCEPSPSS------------------- 401

  Fly   180 PKEATR-STKMICDADGYYNCPHCSKRFCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNH 243
            ..:|:. |.|.:      ::|.|                      |.|.:.|.:.|:||.|.|.|
 Worm   402 SYDASEPSVKRL------HHCTH----------------------PNCGKVYTKSSHLKAHFRTH 438

  Fly   244 LSKPAHKCF--HCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREH 299
            ..:..::|.  .|...|.|.|.|.||.|.|..|.|..|||||..|.....|.:|.:.|
 Worm   439 TGEKPYECSWDGCDWRFARSDELTRHYRKHTGDRPFKCSQCSRAFSRSDHLSLHMKRH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871 15/90 (17%)
COG5048 220..>284 CDD:227381 25/65 (38%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
zf-C2H2 249..271 CDD:278523 9/23 (39%)
C2H2 Zn finger 251..271 CDD:275368 9/21 (43%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 379..399 CDD:275368
C2H2 Zn finger 406..427 CDD:275368
klf-1NP_497632.1 COG5048 398..>481 CDD:227381 32/129 (25%)
C2H2 Zn finger 419..438 CDD:275368 8/18 (44%)
zf-H2C2_2 430..457 CDD:290200 8/26 (31%)
C2H2 Zn finger 446..468 CDD:275368 9/21 (43%)
zf-H2C2_2 460..485 CDD:290200 13/24 (54%)
C2H2 Zn finger 476..496 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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