DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2678 and klu-1

DIOPT Version :9

Sequence 1:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:277 Identity:63/277 - (22%)
Similarity:101/277 - (36%) Gaps:32/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DKNQIINQK--------MQLKSDRQQDTQQMTKTQKPDDDLSQKQTLQAKLQEGNIDGPPESFTL 163
            |:.:.:.|:        |::|.|.:.....::...:......|..|:...|...:.:......|.
 Worm   239 DEREQVEQRLLLRPSSGMEIKKDLETTNSFVSSWAREQIFAMQNATMYNLLTARSAEDCSTISTP 303

  Fly   164 HPRKRTCRTEEQADMIPKEATRSTKMICDADGYYNCPHCSKRFCSQTQLRTHITD-----LC--- 220
            .|.|...|:::.....|::.:...|.:     .|.|..|.:.|....:|..||..     .|   
 Worm   304 GPLKVFPRSKDDMTFAPRDDSSRAKQM-----QYPCTLCGQAFAVHDRLAKHIASRHRQRSCTLD 363

  Fly   221 -----NRCPYCPRTYMQKSNLKRHLRNHLSKPAHKCFHCSKAFMRKDHLKRHLRTHDSDGPLSCS 280
                 ::|..|.:::.:...|.||:|.|.....:.|..|::.|.|.|||..|||||..:.|.:|.
 Worm   364 DASKVHKCNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACP 428

  Fly   281 QCSAVFIEHVQLEIHRREHKQRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCSIPPMLK 345
            .|:........:..|.|.|.....||.|    .|.|..|.::....|...|.....|..|...|.
 Worm   429 MCNYSASRRDMISRHMRTHSLTDDSSIS----TPISQLSIRSATTSPLPPKIGSTATVEIGSGLL 489

  Fly   346 P--KPICDICQKKFSSV 360
            .  |||.........||
 Worm   490 SAFKPILSASSSNLLSV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2678NP_649750.1 zf-AD 8..85 CDD:214871
COG5048 220..>284 CDD:227381 23/71 (32%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
zf-C2H2 249..271 CDD:278523 10/21 (48%)
C2H2 Zn finger 251..271 CDD:275368 10/19 (53%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
C2H2 Zn finger 350..370 CDD:275368 2/11 (18%)
C2H2 Zn finger 379..399 CDD:275368
C2H2 Zn finger 406..427 CDD:275368
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
zf-C2H2 369..391 CDD:278523 6/21 (29%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
zf-H2C2_2 383..408 CDD:290200 8/24 (33%)
COG5048 395..>448 CDD:227381 17/52 (33%)
C2H2 Zn finger 399..419 CDD:275368 10/19 (53%)
zf-H2C2_2 411..436 CDD:290200 10/24 (42%)
C2H2 Zn finger 427..447 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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