DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC1 and EMC1

DIOPT Version :9

Sequence 1:NP_001287215.1 Gene:EMC1 / 40933 FlyBaseID:FBgn0037530 Length:915 Species:Drosophila melanogaster
Sequence 2:NP_009884.1 Gene:EMC1 / 850312 SGDID:S000000550 Length:760 Species:Saccharomyces cerevisiae


Alignment Length:678 Identity:172/678 - (25%)
Similarity:299/678 - (44%) Gaps:128/678 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 LRINALY-LDNCAPAAELEQSLPFPEHFGTPSLSNFDCKQKRNGEGKNCLFL---------FSST 351
            ::.|.|: ||..:..||.:..||          ..|:..:..:.|....|.|         ||:.
Yeast   148 IKNNELHILDEQSKLAEWKLELP----------QGFNKVEYFHREDPLALVLNVNDTQYMGFSAN 202

  Fly   352 SESIVAVQHGRVRWSREESLANVIDSQFVDL-PLADTEGTLENEMKGKAGDFTSFERDIASAFLR 415
            ...::.|      |.|:|.|.||:|...:|: ...|.|  |..:||.:..     ...:.:|:..
Yeast   203 GTELIPV------WQRDEWLTNVVDYAVLDVFDSRDVE--LNKDMKAELD-----SNSLWNAYWL 254

  Fly   416 RITTQAVQIRSL-----------FLHVIGLGPPPTDTQRAGLVRD-SFGLHKMLVLLTRAGKIFG 468
            |:||...::.:|           |..::.|....|      .|.| .||..|:|::||..|.|.|
Yeast   255 RLTTNWNRLINLLKENQFSPGRVFTKLLALDAKDT------TVSDLKFGFAKILIVLTHDGFIGG 313

  Fly   469 IDNVS-GKHHWQLHL---PNVIGFANDEQM-RLIVQRSAKHFPLQPLCTILGKNAVSGNGVLYRF 528
            :|.|: |:..|:|.|   ..|..|..|:.. .|:|.....|:        |.........::...
Yeast   314 LDMVNKGQLIWKLDLEIDQGVKMFWTDKNHDELVVFSHDGHY--------LTIEVTKDQPIIKSR 370

  Fly   529 NPITGKVAEGGLVQLDYRIKQLSLLGETEKDFLKGILLLDASNKVHVYPEHAAPLA----DGMYL 589
            :|::.:.....:::|:....|. |:...:||.|  :..|:......|      |:.    ...::
Yeast   371 SPLSERKTVDSVIRLNEHDHQY-LIKFEDKDHL--LFKLNPGKNTDV------PIVANNHSSSHI 426

  Fly   590 YTADLKTAELAGYFVKYAGGQLSSTHIWNARLGGHNSEQQIIGVAGKNPIEHVHSQGRVLGDRSV 654
            :..:..|..:.||.::  ...:..|  |...:   ||:::::..: |....::::.|..|||:||
Yeast   427 FVTEHDTNGIYGYIIE--NDTVKQT--WKKAV---NSKEKMVAYS-KRETTNLNTLGITLGDKSV 483

  Fly   655 LYKYINPNLVAFVTQAPDSTHKSVLNLYLVDVVSGSVVFTMTHR---KVRAPLSIVHSENWLAYS 716
            ||||:.|||.|::. |.:..|....|  |:|.::|.::.|..|:   ..|.|:.||..|.|:.||
Yeast   484 LYKYLYPNLAAYLI-ANEEHHTITFN--LIDTITGEILITQEHKDSPDFRFPMDIVFGEYWVVYS 545

  Fly   717 YF-NEKLRRTEITTIELYEG----KSQANSSVWSSLQAPPM------PLVERQSYILPTIVEALR 770
            || :|.:...::..:||||.    :..:|||  .:....|:      |..:.:.:|.|.|::.:.
Yeast   546 YFSSEPVPEQKLVVVELYESLTPDERLSNSS--DNFSYDPLTGHINKPQFQTKQFIFPEIIKTMS 608

  Fly   771 ETITERGITNKHVLIGTASGSIVEMPWHLLDPR-RPIASTTQGREEG--AIPYIPELPLPTESHI 832
            .:.|...||.|.:::...:|.|..:|..||:.| :|.....:.:::.  |.||.|.:|      |
Yeast   609 ISKTTDDITTKAIVMELENGQITYIPKLLLNARGKPAEEMAKDKKKEFMATPYTPVIP------I 667

  Fly   833 NYNQTVARLRN--------IYTAPSGLESTCLVVATGLDLFVTRVAPSKTFDLLKEDFD--YILI 887
            |.|..:...||        :.:.|:.||||.::...|||:|.||:.||..|||:...|:  .:||
Yeast   668 NDNFIITHFRNLLPGSDSQLISIPTNLESTSIICDLGLDVFCTRITPSGQFDLMSPTFEKGKLLI 732

  Fly   888 SI-VLVALTSGSLIVKHLASRKLLKQAW 914
            :| ||:.:|   ..::...|.|.||..|
Yeast   733 TIFVLLVIT---YFIRPSVSNKKLKSQW 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC1NP_001287215.1 DUF1620 709..914 CDD:285069 67/229 (29%)
EMC1NP_009884.1 GyrA <279..467 CDD:223266 41/197 (21%)
DUF1620 538..757 CDD:400226 70/246 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343290
Domainoid 1 1.000 85 1.000 Domainoid score I1904
eggNOG 1 0.900 - - E1_KOG2103
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I1155
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004336
OrthoInspector 1 1.000 - - oto99064
orthoMCL 1 0.900 - - OOG6_102462
Panther 1 1.100 - - LDO PTHR21573
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R394
SonicParanoid 1 1.000 - - X3060
TreeFam 00.000 Not matched by this tool.
1110.820

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