DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EMC1 and emc1

DIOPT Version :9

Sequence 1:NP_001287215.1 Gene:EMC1 / 40933 FlyBaseID:FBgn0037530 Length:915 Species:Drosophila melanogaster
Sequence 2:XP_005162246.1 Gene:emc1 / 565399 ZFINID:ZDB-GENE-060810-98 Length:967 Species:Danio rerio


Alignment Length:1018 Identity:360/1018 - (35%)
Similarity:528/1018 - (51%) Gaps:160/1018 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLLPALSLAL-LLGTCSALYEDQIKKFDWRGVNVGALKQSRVDLNHFQ--PRILVTTYEGVVASL 66
            ||:..|:::: ||.|.||::|||:.|||||...:|.::.:..| .|.|  .::||.|.:.|.|||
Zfish     3 WLVVRLAISVSLLYTASAVFEDQVGKFDWRQQYIGKVRFALFD-THSQASKKLLVATDKNVFASL 66

  Fly    67 CVKTGELVWRQVLEQKPRGDVKLLQVSGFADDSSDTAAAPMGSNMGFDMLTVQGHAPALVRGWNT 131
            ..:||:|.||.|.:..|.|.:..|.:.                  |.|.:.|.|:. .|:|.|.|
Zfish    67 NSRTGDLFWRHVDKTGPEGHIDALLMH------------------GQDAVVVVGNG-RLLRSWET 112

  Fly   132 NMGALEWEW----------------------SIMPMNTERAQD-----AMWIY----SKSVLYH- 164
            .:|.|:||.                      :::..:|....|     ..|:.    |.:|.|. 
Zfish   113 TVGGLKWETVLDSGSFQAAALVGVQDYVKYVAVLKKSTIALHDLSSGSQTWVENLPDSDTVQYQT 177

  Fly   165 -------------VLPAWRSHLEVTAYFASSGHSTGSTSKVIAPWITS--ESC-TLSGTFYVCTD 213
                         |||  .||:.:..|....|......| |.|.|::|  .|| .:|....:|.|
Zfish   178 IYSGGNGLVFVLGVLP--NSHIVIVEYKIEDGEIMNKKS-VEAAWMSSLESSCVVVSSGILMCVD 239

  Fly   214 -------------GKQ-------LISLDLVSKSG-QVIRTSLEAEPKGKTQALTGLNGVVIVDGK 257
                         .:|       |.:|||...|| |.:.||.:..|     |...|...:     
Zfish   240 QITQSLYTQPLHSAEQTEMRQIHLQTLDLEVASGFQPVLTSTQPSP-----AHPPLAEFI----- 294

  Fly   258 PISVNKDQSICGDLRSSSFA-VGSFNYRKVLAYADLSSGILRINALY--LDNCAPAAELEQSLPF 319
             :.::.:..|...|:....| :..|:...:.|:|  :||...:.|:.  .::.|.:..|..:...
Zfish   295 -LQLSPEHHILLQLKDGLIAPLRDFSPSYLAAFA--TSGEKTVVAVMSPKNDTACSINLFSADTG 356

  Fly   320 PEHFGTPSLSNFDCKQKRNGEGKNCLFL--FSSTSESI---VAV-----------QHGRVRWSRE 368
            ..|..|..:.:.|    ..|...|.|::  |....:|:   |.|           |.|||.|.||
Zfish   357 RRHLDTTIIYHTD----PYGGKPNKLYVHAFLKKDDSVGYRVMVQTEDLTLTFLQQPGRVVWMRE 417

  Fly   369 ESLANVIDSQFVDLPLADTEGTLENEMKGKAGDFTSFERDIASAFLRRITTQAVQIRSLFLHVIG 433
            |:||:|::.:.|||||..|:..||.|...||    :.:..:....|:|:::|.:.:::...|:..
Zfish   418 EALADVVNMEMVDLPLTGTQAELEGEFGKKA----AIQDGLLPMVLKRLSSQFILLQAWMAHLWK 478

  Fly   434 L----GPPPTDTQRA----GLVRDSFGLHKMLVLLTRAGKIFGIDNVSGKHHWQLHLPNVIGFAN 490
            |    ..|.:..:..    .|.||.|.|.||:|::|.:||:||||:.||...|:.:|.|:   ..
Zfish   479 LFYDARKPRSSVKNEITIDTLSRDEFNLQKMMVMVTASGKLFGIDSRSGTVLWKQYLENI---KP 540

  Fly   491 DEQMRLIVQRSAKHFPLQPLCTILGKNAVSGNGVLYRFNPITGKVAEGGLVQLDYRIKQLSLLGE 555
            :...:|||||:..|||..|.||:|.|:..:|.|.||.||||.||.::..:..|...|.|..||..
Zfish   541 NSFFKLIVQRTTAHFPHPPQCTLLIKDQDTGLGSLYVFNPIFGKKSQISVPALPRPILQSLLLPV 605

  Fly   556 TEKDFLKGILLLDASNKVHVYP------EHAAPLADGMYLYTADLKTAELAGYFVKYAGGQLSST 614
            .::|:.|.:||:|..|||..:|      :.....|..::.|..|....:|:|:.::   ..||:.
Zfish   606 IDQDYSKVLLLIDDQNKVTAFPSTKNILQQLQETASSIFFYLVDSNQGKLSGFRLR---TDLSTE 667

  Fly   615 HIWNARLGGHNSEQQIIGVAGKNPIEHVHSQGRVLGDRSVLYKYINPNLVAFVTQAPDSTH--KS 677
            .||...:  ....|:|:.|.||...|||||||||:|||||||||:||||:|.:|::.| ||  :|
Zfish   668 LIWEVVI--PTEVQKIVAVKGKRANEHVHSQGRVMGDRSVLYKYLNPNLLAVITESTD-THQERS 729

  Fly   678 VLNLYLVDVVSGSVVFTMTHRKVRAPLSIVHSENWLAYSYFNEKLRRTEITTIELYEGKSQANSS 742
            .:.::|:|.|:|.:|.....||.|.|:..||||||:.|.|:|.|.||.|.:.:||:||....||:
Zfish   730 FVGIFLIDGVTGRIVHEAVQRKARGPVHCVHSENWVIYVYWNSKFRRNEFSVLELFEGAELYNST 794

  Fly   743 VWSSLQAPPMPLVERQSYILPTIVEALRETITERGITNKHVLIGTASGSIVEMPWHLLDPRRPIA 807
            |:|||..|..|.|.:||||.|..:..|..|:||:|||::|:|:|..||:|:.:|...||||||..
Zfish   795 VFSSLDRPHPPQVLQQSYIFPAPISTLEATLTEKGITSRHLLVGLPSGNILSLPKMFLDPRRPEV 859

  Fly   808 STTQGREEGAIPYIPELPLPTESHINYNQTVARLRNIYTAPSGLESTCLVVATGLDLFVTRVAPS 872
            .:.|.|||..|||.||:|:.||..|||||||:|:|.||||||||||||||||.|||::.|||.||
Zfish   860 VSEQSREENLIPYAPEMPIRTEWFINYNQTVSRVRGIYTAPSGLESTCLVVAYGLDIYQTRVFPS 924

  Fly   873 KTFDLLKEDFDYILISIVLVALTSGSLIVKHLASRKLLKQAWK 915
            |.||:||:|:||:|||.||:.|...::|.|.||..|||.:||:
Zfish   925 KQFDVLKDDYDYVLISSVLLGLFFATMISKRLAEVKLLNRAWR 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC1NP_001287215.1 DUF1620 709..914 CDD:285069 115/204 (56%)
emc1XP_005162246.1 PQQ_2 27..239 CDD:290097 59/234 (25%)
DUF1620 761..966 CDD:285069 115/204 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579246
Domainoid 1 1.000 239 1.000 Domainoid score I2229
eggNOG 1 0.900 - - E1_KOG2103
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9002
Inparanoid 1 1.050 513 1.000 Inparanoid score I1271
OMA 1 1.010 - - QHG58306
OrthoDB 1 1.010 - - D1017611at2759
OrthoFinder 1 1.000 - - FOG0004336
OrthoInspector 1 1.000 - - otm26296
orthoMCL 1 0.900 - - OOG6_102462
Panther 1 1.100 - - O PTHR21573
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R394
SonicParanoid 1 1.000 - - X3060
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.