DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EMC1 and Emc1

DIOPT Version :9

Sequence 1:NP_001287215.1 Gene:EMC1 / 40933 FlyBaseID:FBgn0037530 Length:915 Species:Drosophila melanogaster
Sequence 2:NP_666269.2 Gene:Emc1 / 230866 MGIID:2443696 Length:997 Species:Mus musculus


Alignment Length:1039 Identity:352/1039 - (33%)
Similarity:507/1039 - (48%) Gaps:191/1039 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALLLGTCSALYEDQIKKFDWRGVNVGALKQSRVDLNHFQPRILVTTYEGVVASLCVKTGELVWRQ 77
            |:||...:|:||||:.|||||...||.:|.:.::.:....:::|.|.:.|:|:|..:|||::||.
Mouse    14 AVLLVPAAAVYEDQVGKFDWRQQYVGKIKFASLEFSPGSKKLVVATEKNVIAALNSRTGEILWRH 78

  Fly    78 VLEQKPRGDVKLLQVSGFADDSSDTAAAPMGSNMGFDMLTVQGHAPALVRGWNTNMGALEWE--- 139
            |.:....|.|..:.|.                  |.|.:|| .:...|:|.|.||:|.|.||   
Mouse    79 VDKGTAEGAVDAMLVH------------------GQDAITV-SNGGRLMRSWETNIGGLNWEITL 124

  Fly   140 --WSIMPMNTERAQDAM----------------------WI----YSKSVLYHVL------PAWR 170
              .|...:.....|:::                      |:    .|.|:||.::      ..|.
Mouse   125 DTGSFQALGLVGLQESVRYIAVLKKTTLTLHHLSSGHLKWVEHLPESDSILYQMVYSYGSGVVWA 189

  Fly   171 ------SHLEVTAYFASSGHSTGSTSKVIAPW---ITSESCTLSGTFYVCTDGKQ---------- 216
                  ||:.:..:....|...... :|..||   :|.....:.....||.|...          
Mouse   190 LGIVPFSHVNIVKFNVEDGEIVQQV-RVWTPWLQHLTGACGVVDEAVLVCPDPSSHSLHTLALET 253

  Fly   217 --------LISLDLVSKSG---QVIRTS------------LEAEP----------------KGKT 242
                    |.|.||...||   ||:.|.            |:..|                |...
Mouse   254 EWELRQIPLQSPDLEFGSGFQPQVLPTQPSPVAPSRAQFFLQLSPSHYALLHYHHGAVTLLKNFP 318

  Fly   243 Q------ALTGLNGVVIVDGKPISVNKDQSICGDLRSSSF--------AVGSFN--YRKVLAYAD 291
            |      |.||...|..|......|.|..| .||...:||        ::..||  |...|...:
Mouse   319 QATLVSFATTGEKTVAAVMTCRTEVQKPVS-AGDGSVASFPETSGAQDSLACFNQTYTINLYLVE 382

  Fly   292 LSSGILRINALYLDNCAPAAELEQSLPFPEHFGTPSLSNFDCKQKRNGEGKNCLFLFSSTSESIV 356
            ....:|..:..:        .|||....||..   .:..|  .:|.:..|...|.......:..:
Mouse   383 TGRRLLDTSISF--------SLEQKGTRPEQL---YIQVF--LKKDDSVGYRALVQTQDHLQLFL 434

  Fly   357 AVQHGR-VRWSREESLANVIDSQFVDLPLADTEGTLENEMKGKAGDFTSFERDIASAFLRRITTQ 420
            ....|: |.||||||||.|:..:.|||||...:..||.|...||    :.:..:...||:|:::|
Mouse   435 QQLAGKVVLWSREESLAEVVCLEMVDLPLTGAQAELEGEFGKKA----AIQDGLLGMFLKRLSSQ 495

  Fly   421 AVQIRSLFLHV-----------------IGLGPPPTDTQRAGLVRDSFGLHKMLVLLTRAGKIFG 468
            .:.:::...|:                 |.:     ||    |.||.|.|.||:|.:|.:||:||
Mouse   496 LILLQAWTSHLWKMFYDARKPRSQIKNEINI-----DT----LARDEFNLQKMMVTVTASGKLFG 551

  Fly   469 IDNVSGKHHWQLHLPNVIGFANDEQMRLIVQRSAKHFPLQPLCTILGKNAVSGNGVLYRFNPITG 533
            |::.||...|:.:||||   ..|...:|:|||:..|||..|.||:|.|:..:|...|:.||||.|
Mouse   552 IESSSGTILWKQYLPNV---KPDSSFKLMVQRTTAHFPHPPQCTLLVKDKETGMSSLFVFNPIFG 613

  Fly   534 KVAEGGLVQLDYRIKQLSLLGETEKDFLKGILLLDASNKVHVYP------EHAAPLADGMYLYTA 592
            |.::.....|...|.|..||...::|:.|.:||:|...||..:|      .....||..::.|..
Mouse   614 KWSQVAPPVLKRPILQSLLLPVMDQDYAKVLLLVDDEYKVTAFPATRNVLRQLHELAPSIFFYLV 678

  Fly   593 DLKTAELAGYFVKYAGGQLSSTHIWNARLGGHNSEQQIIGVAGKNPIEHVHSQGRVLGDRSVLYK 657
            |.:...|:||.::   ..|::...|...:  ....|:::.|.||...|||||||||:||||||||
Mouse   679 DAEQGRLSGYQLR---KDLTTELSWELTI--PPEVQRVVKVKGKRSSEHVHSQGRVMGDRSVLYK 738

  Fly   658 YINPNLVAFVTQAPDSTH-KSVLNLYLVDVVSGSVVFTMTHRKVRAPLSIVHSENWLAYSYFNEK 721
            .:||||:|.||::.|..| ::.:.::|:|.|:|.::.:...:|.|.|:.:||||||:.|.|:|.|
Mouse   739 SLNPNLLAVVTESTDVHHERTFIGIFLIDGVTGRIIHSSVQKKARGPVHLVHSENWVVYQYWNSK 803

  Fly   722 LRRTEITTIELYEGKSQANSSVWSSLQAPPMPLVERQSYILPTIVEALRETITERGITNKHVLIG 786
            .||.|:|.:|||||..|.|::.:|||..|.:|.|.:||||.|:.:.|:..||||||||::|:|||
Mouse   804 ARRNELTALELYEGTEQYNATAFSSLDRPQLPQVLQQSYIFPSSISAMEATITERGITSRHLLIG 868

  Fly   787 TASGSIVEMPWHLLDPRRPIASTTQGREEGAIPYIPELPLPTESHINYNQTVARLRNIYTAPSGL 851
            ..||:|:.:|..|||||||...|.|.|||..|||.|::.:..|..|||||||:|:|.||||||||
Mouse   869 LPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQVHAERFINYNQTVSRMRGIYTAPSGL 933

  Fly   852 ESTCLVVATGLDLFVTRVAPSKTFDLLKEDFDYILISIVLVALTSGSLIVKHLASRKLLKQAWK 915
            ||||||||.|||::.|||.|||.||:||:|:||:|||.||..|...::|.|.||..|||.:||:
Mouse   934 ESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC1NP_001287215.1 DUF1620 709..914 CDD:285069 118/204 (58%)
Emc1NP_666269.2 PQQ_2 63..254 CDD:290097 43/210 (20%)
DUF1620 791..996 CDD:285069 118/204 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835876
Domainoid 1 1.000 247 1.000 Domainoid score I2160
eggNOG 1 0.900 - - E1_KOG2103
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9002
Inparanoid 1 1.050 525 1.000 Inparanoid score I1234
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58306
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004336
OrthoInspector 1 1.000 - - oto92174
orthoMCL 1 0.900 - - OOG6_102462
Panther 1 1.100 - - LDO PTHR21573
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R394
SonicParanoid 1 1.000 - - X3060
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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