DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC1 and emc1

DIOPT Version :10

Sequence 1:NP_649747.1 Gene:EMC1 / 40933 FlyBaseID:FBgn0037530 Length:915 Species:Drosophila melanogaster
Sequence 2:XP_031761215.1 Gene:emc1 / 100494947 XenbaseID:XB-GENE-1010282 Length:990 Species:Xenopus tropicalis


Alignment Length:38 Identity:14/38 - (36%)
Similarity:18/38 - (47%) Gaps:6/38 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PMTRIQEVFRSLMAPEEIRG--KKYYQQYV--PNAENQ 62
            |.|.:.....||  |:..:|  .:.|||.|  ||..||
 Frog   727 PYTSVPTYQVSL--PQGSQGIPHQTYQQPVMFPNQSNQ 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC1NP_649747.1 EMC1_C 709..914 CDD:462261
emc1XP_031761215.1 PQQ_2 25..253 CDD:433144
EMC1_C 784..989 CDD:462261
Blue background indicates that the domain is not in the aligned region.

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