DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS9 and LOC102548369

DIOPT Version :9

Sequence 1:NP_524270.2 Gene:mRpS9 / 40932 FlyBaseID:FBgn0037529 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_038950006.1 Gene:LOC102548369 / 102548369 RGDID:7517571 Length:146 Species:Rattus norvegicus


Alignment Length:139 Identity:45/139 - (32%)
Similarity:68/139 - (48%) Gaps:20/139 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 QYITTYECLRKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQFSELLGK-----VD 326
            |.:..:.| :|||.| |.....|.|.|.:||:.:...|....:.:||.|:..   |||     ||
  Rat     8 QSVQVFGC-KKTATA-VAHCKGGNGLIKVNGRSLEMIELCTLQYKLLEPVLH---LGKERFAGVD 67

  Fly   327 VEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMR--LAGLLTR--------DYRRRERKKF 381
            ::..|:|||...|..|||..|:.:|.::..:.:.|:.:  :..:|.:        |.||.|.|||
  Rat    68 IQVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYNPTLPVADPRRCESKKF 132

  Fly   382 GQEGARRKY 390
            |..|||..|
  Rat   133 GSPGARALY 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS9NP_524270.2 Ribosomal_S9 276..395 CDD:278792 43/130 (33%)
LOC102548369XP_038950006.1 PLN00210 6..146 CDD:177799 45/139 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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