DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wtrw and Trpa1

DIOPT Version :9

Sequence 1:NP_731193.1 Gene:wtrw / 40931 FlyBaseID:FBgn0260005 Length:986 Species:Drosophila melanogaster
Sequence 2:NP_997491.1 Gene:Trpa1 / 312896 RGDID:1303284 Length:1125 Species:Rattus norvegicus


Alignment Length:1140 Identity:232/1140 - (20%)
Similarity:419/1140 - (36%) Gaps:376/1140 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DIEQSNVVAEGIRTHFESASKLE-KNLCYL-WAAYLKRWDLIESLLEAGA--DLHFCDQNGISAL 187
            |||......|....:....||.| :|||.| .||...:.:|::.::...:  .|:..|..|.:.|
  Rat    39 DIEGDMCRLEAFIKNRRKLSKYEDENLCLLHHAAAEGQVELMQLIINGSSCEALNVMDDYGNTPL 103

  Fly   188 HLSAFSGCLATLGLLVAKGLNVNLQSK-CYTPLHCAA------------------------FGNA 227
            |.:|....:.::..|:::|.|.||::: ...|||.|.                        .||.
  Rat   104 HWAAEKNQVESVKFLLSQGANPNLRNRNMMAPLHIAVQGMYNEVIKVLTEHKATNINLEGENGNT 168

  Fly   228 A----------EAAKLLINNGADISKD-------------TSKPNCEE----------------- 252
            |          ||.::|:..||.:.|.             :....|.|                 
  Rat   169 ALMSTCAKDNSEALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKRCMELILAYGEKTGYSREAHI 233

  Fly   253 --------SLLHCAVRSNALECLQIFIAEGADVNSLKPNGTNAIHLAADLGNIQCLEALLNAPNA 309
                    |.||.||:|..|:.:::.:..||.::.::.....|:|.||..|....::.::::...
  Rat   234 NFVNHKKASPLHLAVQSGDLDMIKMCLDSGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTG 298

  Fly   310 DANVRICIREKESTALH---------------------------------LAADEGNVECVDLLL 341
            .:::...:...:.|.||                                 ||....:...|:|||
  Rat   299 SSDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVNLLL 363

  Fly   342 AKGADAKLKNH--------------------------------------RGFTPLHLAARTSSLD 368
            :|||...:|:|                                      .|.||||.|.|..:..
  Rat   364 SKGAKVDIKDHLGRNFLHLTVQQPYGLRNLRPEFLQMQHIKELVMDEDNDGCTPLHYACRQGAPV 428

  Fly   369 CVESLLRNGNADANAEDFDHRTPLH--AAVGK-------------------------------SE 400
            .|.:||| .|...:::..|.::|||  |:.|:                               ::
  Rat   429 SVNNLLR-FNVSVHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAK 492

  Fly   401 NAYD-IMETLIQWGA----------NVNHKDIYGF-----------------------TALHLAA 431
            |.:| :::.|::.||          .::|..:.|:                       ||||.||
  Rat   493 NGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAA 557

  Fly   432 LDGLVQCVEMLIFHGADV------------------------TTKSKKGTSALNVITRKTPASVA 472
            .:|..:.|.||:.:.||:                        |.:||:....|.|.|..:|::..
  Rat   558 REGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTTIRSKRWDECLQVFTHDSPSNRC 622

  Fly   473 MIRQK-----------LDAAITLHHSQDPVNREVELELDFRQL------------LQHCHPREIS 514
            .|.:.           ||..: :..::|...::..:|.:|:.|            .|......::
  Rat   623 PIMEMVEYLPECMKVLLDFCM-IPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVTPTQDVIYEPLT 686

  Fly   515 YLNTFVDEGQKEILEHPLCSSFLYIKWGK--IRKYYIGRLIFCFSFVLFLTLYVLTALAHNCYNG 577
            .||..|...:.|:|.||:|..:|.:||..  .|.:.:....:|...:. :||.|:.......:|.
  Rat   687 ILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRAHMMNLGSYCLGLIP-MTLLVVKIQPGMAFNS 750

  Fly   578 SKNDNTTIPAQELCQKQSILGDMLRNNPFVMEMQWWVLVAIT--------IVEIFRKLYGITGYS 634
            :...|.||...|  ::.:.|      |.|.::: ..:||.::        :|:||::.       
  Rat   751 TGIINETISTHE--ERINTL------NSFPLKI-CMILVFLSSIFGYCKEVVQIFQQK------- 799

  Fly   635 SFRHYVTQVENIMEWFVITS--VFVISYIYTNKTYTFQNHIGAFAVLLGWTNLMLMIGQLPVFDV 697
              |:|.....|.:||.:.|:  :||:........| .|...||.|:...|.|.:|.:.:.....:
  Rat   800 --RNYFLDYNNALEWVIYTTSMIFVLPLFLDIPAY-MQWQCGAIAIFFYWMNFLLYLQRFENCGI 861

  Fly   698 YVAMYTRVQGEFAKLFMAYSCMLIGFTISFCVIFPSSSSFANPFMGFITVLVMMIGE---QDLSL 759
            ::.|...:.....:....:..:|:.|.:||.|:.....:|:.|.:..|....||:|:   :|..|
  Rat   862 FIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFL 926

  Fly   760 LINDPEGKDPPFLLEVSAQI-TF---VLFLLFVTIILMNLLVGIAVHDIQGLKKTAGLSKLVRQT 820
                    :|.|..|::..: ||   :.|.:||.|:|||||:|:||.||..::|.|.|.::..|.
  Rat   927 --------EPLFRNELAYPVLTFGQLIAFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQV 983

  Fly   821 KLISYIESALFNGYLPTW-LRNLLHYTALVSPQAYRVVLCVKPLNPSEKRLPREILMKAYEVGKM 884
            :|.:.:|..     ||.| ||.:...:.:|.|..                 ||.        |:|
  Rat   984 ELHTNLEKK-----LPFWYLRKVDQRSTIVYPNR-----------------PRH--------GRM 1018

  Fly   885 RKHFGHTISSKNSAENYLSYKNKYNNNNGATTGYVLPDSDPDAGQFTTLTTKIDDNADRIEFLTQ 949
            .:.|.:.:|.:.:.:.                   .|:.|      |.|..:|.....|::.|| 
  Rat  1019 LRFFHYFLSMQETRQE-------------------APNID------TCLEMEILKQKYRLKDLT- 1057

  Fly   950 EIQELKQALISQQQQASK-VIDKLLIVISNQQKQN 983
                   :|:.:|.:..| :|.|:.|:...:.:.|
  Rat  1058 -------SLLEKQHELIKLIIQKMEIISETEDEDN 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtrwNP_731193.1 Ank_2 156..241 CDD:289560 26/121 (21%)
ANK repeat 182..213 CDD:293786 9/30 (30%)
ANK repeat 215..242 CDD:293786 12/60 (20%)
ANK 216..341 CDD:238125 36/229 (16%)
ANK repeat 250..281 CDD:293786 11/55 (20%)
Ank_2 255..351 CDD:289560 25/128 (20%)
ANK repeat 283..317 CDD:293786 5/33 (15%)
ANK 323..443 CDD:238125 48/257 (19%)
ANK repeat 323..351 CDD:293786 12/60 (20%)
Ank_2 325..420 CDD:289560 37/209 (18%)
ANK repeat 353..385 CDD:293786 12/31 (39%)
ANK repeat 387..420 CDD:293786 12/76 (16%)
Ank_2 392..>460 CDD:289560 26/158 (16%)
ANK repeat 422..452 CDD:293786 14/76 (18%)
Ion_trans 613..812 CDD:278921 55/215 (26%)
Trpa1NP_997491.1 ANK 1 63..94 8/30 (27%)
Ank_2 83..>373 CDD:393464 52/289 (18%)
ANK repeat 98..129 CDD:293786 9/30 (30%)
ANK 2 98..127 7/28 (25%)
ANK repeat 131..163 CDD:293786 4/31 (13%)
ANK 3 131..161 4/29 (14%)
ANK 4 165..194 8/28 (29%)
ANK repeat 165..190 CDD:293786 6/24 (25%)
ANK repeat 198..237 CDD:293786 2/38 (5%)
ANK 5 198..227 2/28 (7%)
ANK repeat 239..268 CDD:293786 9/28 (32%)
ANK 6 239..268 9/28 (32%)
ANK 7 272..301 5/28 (18%)
ANK repeat 276..307 CDD:293786 5/30 (17%)
ANK repeat 309..340 CDD:293786 3/30 (10%)
ANK 8 309..338 3/28 (11%)
ANK repeat 342..373 CDD:293786 9/30 (30%)
ANK 9 342..371 9/28 (32%)
ANK repeat 413..444 CDD:293786 12/31 (39%)
ANK 10 413..442 12/29 (41%)
Ank_2 418..507 CDD:372319 18/89 (20%)
ANK repeat 446..480 CDD:293786 6/33 (18%)
ANK 11 446..475 6/28 (21%)
ANK repeat 482..512 CDD:293786 5/29 (17%)
ANK 12 482..511 5/28 (18%)
Ank_2 487..578 CDD:372319 19/90 (21%)
ANK repeat 514..546 CDD:293786 2/31 (6%)
ANK 13 514..543 2/28 (7%)
ANK 14 548..577 12/28 (43%)
ANK repeat 548..573 CDD:293786 10/24 (42%)
Ion_trans <799..975 CDD:366146 50/193 (26%)
Inositolphosphate binding. /evidence=ECO:0000250|UniProtKB:O75762 1048..1054 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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