DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wtrw and osm-9

DIOPT Version :9

Sequence 1:NP_731193.1 Gene:wtrw / 40931 FlyBaseID:FBgn0260005 Length:986 Species:Drosophila melanogaster
Sequence 2:NP_500372.1 Gene:osm-9 / 177117 WormBaseID:WBGene00003889 Length:937 Species:Caenorhabditis elegans


Alignment Length:952 Identity:173/952 - (18%)
Similarity:308/952 - (32%) Gaps:312/952 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 EGIRTHFESASK-------LEKNLCYLWAAYLKRWDLIESLLEAGAD--LHFCDQNGISALHLSA 191
            ||::..|:...|       .|||..|.|.|..|..:||......|.:  |.|.::..::.|:...
 Worm    15 EGVKLAFDPDEKWSNLYREREKNHLYKWVAVRKGGELINIYERDGEEGVLKFAEEKLLTILYDEG 79

  Fly   192 FSGCLATLGLLV--AKGLNVNLQSKCYTPLHCAAFGNAAEAAKLLINNGADISKDTSKPNCEESL 254
            .:..|.|....:  .||:||.|             |.:.|            |.|..:...:|  
 Worm    80 QNPKLVTYSDYIKWKKGVNVQL-------------GLSEE------------SVDMQQSRFKE-- 117

  Fly   255 LHCAVRSNALECLQIFIAEGADVNSLKPNGTNAIHLAADLGNIQCLE----ALLNAPNADANVRI 315
             |.|:..               :|.....|.|.|||..:.....|.|    .|...|....::.:
 Worm   118 -HYALWK---------------LNKRGVEGENLIHLLLNREQQVCYEIARILLKRFPGMANDIYL 166

  Fly   316 CIREKESTALHLAADEGNVECVDLLLAKGADAKLKNHRGFTPLHLAARTSSLDCVESLLRNGNAD 380
            ...:...:|||||....:.|.|.|||                                  |..||
 Worm   167 GDEQFGQSALHLAIVHDDYETVSLLL----------------------------------NSKAD 197

  Fly   381 ANA---------EDFDHRTPL-----HAAVGKSENAY-------DIMETLIQWGANVNHKDIYGF 424
            .||         |||.....:     :|..|:...|:       ||.:.|||:|||.|.:|.:|.
 Worm   198 VNARACGNFFLPEDFKLTNKITDYQGYAYYGEYPLAFAACFGNKDIYDLLIQFGANPNLQDSFGN 262

  Fly   425 TALHLAALDGLVQCVEMLIFHGADVTTKSKKGTSALNVITRKTPASVAMIRQKLDAAITLHHSQD 489
            |.||:..::.........:.|.|                   .||         |..:..|....
 Worm   263 TILHMCVINYSSSMYSYAVRHWA-------------------KPA---------DPHVVNHAGFT 299

  Fly   490 PVNREVEL--ELDFRQLLQ------------HCHPREISYLNTFVDEGQ---------------- 524
            |:....:|  :..|.::|:            .|....::.|:|...:|.                
 Worm   300 PLTLATKLGRKQIFEEMLEIMKVEFWRFSDMTCSAYPLNTLDTIQPDGSTNYDSALMTVINGSTP 364

  Fly   525 -------KEILEHPLCSSFLYIKWGKI-RKYYIGRLIFCFSFVLFLTLYVLTALAHNCYNGSKND 581
                   .|:::..|..     ||... ::..|.||:..  .|..:||.::..:.          
 Worm   365 EHLDMIGSEVIQRLLAD-----KWKAFAQRKLIERLVLL--IVQLITLSIVVYIR---------- 412

  Fly   582 NTTIPAQELCQKQSILGDMLRNNPFVMEMQW--WVLVAITIVEIFRKLYGITGYSSFRHYVTQ-- 642
            .|.:|                 ..::.:.||  ::..|..::.|...:: ..||.......||  
 Worm   413 PTELP-----------------RLYMEDPQWDDYIRTACELLTILNCIF-FVGYQQLGEIRTQGM 459

  Fly   643 ---VENI-----MEWFVITSVFVISYI--YTNKTYTFQNHIGAFAVLLGWTNLMLMIGQLPVFDV 697
               :.|:     ...|.|.::|::..|  ...|.:..:..:..||:...|..|:.......:...
 Worm   460 RGYLRNLKTAPAKAVFCIANLFLLLCIPFRLMKKHEIEEALFVFALPGSWIFLLFFARSAKLTGP 524

  Fly   698 YVAM-YTRVQGE--------------FAKLFM----------------AYSCMLIGFTISFCVIF 731
            :|.| |:.:.|:              |:::|.                .::|.:.|:||.....|
 Worm   525 FVQMIYSMIAGDMIRFAIISAIFLVSFSQVFYFVGKDMDAKQKLEDTNPHACRISGYTIYTYNTF 589

  Fly   732 PSSSSFANPFMGFITVLVMMIGEQDLSLLINDPEGKDPPFLLEVS-------AQITFVLFLLFVT 789
            |.:         |||:....:|..|..               |.|       .:..|||::..:.
 Worm   590 PET---------FITLFRASMGGYDYE---------------EFSCANYQALTKTLFVLYMFVMP 630

  Fly   790 IILMNLLVGIAVHDIQGLKKT---AGLSKLVRQ--TKLISYIESALFNGYLPTWLRNLLHYTALV 849
            |:::|:|:.     :.|...|   |...|..||  .:::..:|.::....|..   :.|.|:..:
 Worm   631 IMMINILIA-----MMGNTYTTVIAQAEKAWRQQYAQIVMVLERSVGKERLAA---SQLEYSIRL 687

  Fly   850 -----SPQAYRVVLCVKPLNPSEKRLPREILMKAYEVGKMRKHFGHTISSKNSAENYLSYKNKYN 909
                 |....|.::.:|....:..|..::.:.....:|  ||.. ||| .|...|..:...:.::
 Worm   688 DQEGSSGMEVRGLMVIKQTKKTRARQRKQAIYNWKTIG--RKVI-HTI-DKVGTEQAVLLLHGHD 748

  Fly   910 NNNGATTGYVLPDSDPDAGQFTTLTTKIDDNADRIEFLTQEI 951
            ..:.....:|.|:..|...:..|......:::.|::..|..:
 Worm   749 RLDRVYEDHVQPEKVPSRSRTPTRIGTTLNSSKRLKTTTMVV 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtrwNP_731193.1 Ank_2 156..241 CDD:289560 18/88 (20%)
ANK repeat 182..213 CDD:293786 8/32 (25%)
ANK repeat 215..242 CDD:293786 2/26 (8%)
ANK 216..341 CDD:238125 25/128 (20%)
ANK repeat 250..281 CDD:293786 4/30 (13%)
Ank_2 255..351 CDD:289560 22/99 (22%)
ANK repeat 283..317 CDD:293786 9/37 (24%)
ANK 323..443 CDD:238125 35/140 (25%)
ANK repeat 323..351 CDD:293786 10/27 (37%)
Ank_2 325..420 CDD:289560 29/115 (25%)
ANK repeat 353..385 CDD:293786 5/40 (13%)
ANK repeat 387..420 CDD:293786 12/44 (27%)
Ank_2 392..>460 CDD:289560 19/79 (24%)
ANK repeat 422..452 CDD:293786 6/29 (21%)
Ion_trans 613..812 CDD:278921 43/251 (17%)
osm-9NP_500372.1 trp 49..789 CDD:273311 162/915 (18%)
ANK repeat 171..202 CDD:293786 15/64 (23%)
ANK repeat 227..258 CDD:293786 11/30 (37%)
ANK repeat 260..294 CDD:293786 9/61 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7476
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

Return to query results.
Submit another query.