DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArgRS-m and RARS2

DIOPT Version :9

Sequence 1:NP_001262351.1 Gene:ArgRS-m / 40929 FlyBaseID:FBgn0037526 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001337434.1 Gene:RARS2 / 57038 HGNCID:21406 Length:588 Species:Homo sapiens


Alignment Length:602 Identity:212/602 - (35%)
Similarity:329/602 - (54%) Gaps:70/602 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RQAICEQLPHLKN---------------------ACYALEVPVKKQQLQNSRRPTVEWILPSAFA 71
            |:||..||..:.|                     |.:.|.|....::..:..||.:         
Human     6 RRAIACQLSRVLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDI--------- 61

  Fly    72 QQEVELLDSLKKRRFEAYVENVRIVPSAGRSAA--KIEFQLQPQVFVEQLLQT-KEIALHPSPFA 133
              :|:.....:|.|.:..|..:    |.|:...  ||..:|..:..::|:::. .:..|....|:
Human    62 --QVQAKRLAEKLRCDTVVSEI----STGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS 120

  Fly   134 A---EHIVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHEHLGYRTTRLNYLGDWGTQFGLLVLGV 195
            .   :.||||:||||:||.|||||||||||||.:|||.|.||::..|:|||||||.|||||..|.
Human   121 GLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGF 185

  Fly   196 QLLNVSDKEMQLSPIETLYKSYVAANKAAEQRPEIAQQARDLFAALEGGTDKSMAKKWQQYRNYT 260
            ||....:| :|.:|::.|::.||..||.|.....:|:.|::.|..||.| |......||::|:.:
Human   186 QLFGYEEK-LQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELG-DVQALSLWQKFRDLS 248

  Fly   261 IEDLSKVYNRLGVHFDSYEWESQYSQQQIQDVLDKLRSAGLLQPEHDGREIVVVDGRRIP----- 320
            ||:..:||.||||:||.|..||.| :::.|:||..|.|.|||.....|..:|.:.|...|     
Human   249 IEEYIRVYKRLGVYFDEYSGESFY-REKSQEVLKLLESKGLLLKTIKGTAVVDLSGNGDPSSICT 312

  Fly   321 VIKSNGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKTTAALDDRLSLEQLQHVK 385
            |::|:|::||..||:||.::|:.::.|..::||.|.||..||..:|:....:....: |:.|||.
Human   313 VMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWA-ERCQHVP 376

  Fly   386 FGRIYGMSTRQGKAIFLKDVLDEARDIMREKRNISA--TTRENYNLDDEHVCDILGVSAVLVNVL 448
            ||.:.||.||:|...||:|||:|.:  :|..:|:::  ||:|..|  .:...:.:|::|:::...
Human   377 FGVVQGMKTRRGDVTFLEDVLNEIQ--LRMLQNMASIKTTKELKN--PQETAERVGLAALIIQDF 437

  Fly   449 KQRRQRDHEFSWQQALQVNGDTGIKLQYTHCRLHSLLDNFRDVDLDDIKPDWKHFST----EPAD 509
            |.....|::|||.:..|..||||:.|||||.|||||.:.|....|:|       |:|    || .
Human   438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCGYLND-------FNTACLQEP-Q 494

  Fly   510 ALDLLYALARFDQSVWQSKEQLEACVLVNYLFGLCNATSQALKRLPVKQESSLEKQLQRLLLFHA 574
            ::.:|..|.|||:.:::|.:..:...:|:||..|.:..:.|.|.|.:| :|..|....||.||.|
Human   495 SVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK-DSPPEVAGARLHLFKA 558

  Fly   575 AKKTLRHGMELLGLRPL 591
            .:..|.:||:|||:.|:
Human   559 VRSVLANGMKLLGITPM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArgRS-mNP_001262351.1 ArgS 67..594 CDD:223097 201/542 (37%)
nt_trans 137..397 CDD:294020 119/264 (45%)
Anticodon_Ia_like 436..594 CDD:299868 57/160 (36%)
RARS2NP_001337434.1 tRNA-synt_1d 36..576 CDD:332079 206/572 (36%)
'HIGH' region 133..144 8/10 (80%)
L-arginine binding. /evidence=ECO:0000250|UniProtKB:P54136 133..135 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144328
Domainoid 1 1.000 248 1.000 Domainoid score I2149
eggNOG 1 0.900 - - E1_COG0018
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5707
Inparanoid 1 1.050 317 1.000 Inparanoid score I2551
Isobase 1 0.950 - 0 Normalized mean entropy S1330
OMA 1 1.010 - - QHG60659
OrthoDB 1 1.010 - - D463402at2759
OrthoFinder 1 1.000 - - FOG0004604
OrthoInspector 1 1.000 - - oto91508
orthoMCL 1 0.900 - - OOG6_100350
Panther 1 1.100 - - LDO PTHR11956
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1455
SonicParanoid 1 1.000 - - X3222
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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