DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArgRS-m and CG8097

DIOPT Version :9

Sequence 1:NP_001262351.1 Gene:ArgRS-m / 40929 FlyBaseID:FBgn0037526 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001285279.1 Gene:CG8097 / 32495 FlyBaseID:FBgn0030660 Length:446 Species:Drosophila melanogaster


Alignment Length:478 Identity:105/478 - (21%)
Similarity:173/478 - (36%) Gaps:151/478 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 RPEIAQQARDLFAAL----EGGTDKS---MAKKWQQYRNYTIEDLSKVYNRLGVHFDSYEWESQY 284
            |.::.||..:.|...    |.|.|.:   :.||:.:...|..:||::..:........| |:...
  Fly     6 RLQVGQQLFEFFTKPEKPDESGGDVAAPLLLKKFGKLIRYNNDDLTEQGDLTLAAIPRY-WQKYL 69

  Fly   285 SQQQIQDVLDKLRSAGLLQPEHDGREIVVVDGRRIPVIKSNGSTLYLARDIAAL-LERLS-RFQF 347
            ..|.:     |||.        ||.|::.....|:.:::.:....:...:|..| .||.| |||.
  Fly    70 KSQGL-----KLRI--------DGDELLPSPVDRLELMEHSRKWRFPLAEITVLNKERYSLRFQR 121

  Fly   348 SRLLYVV---------DNGQADHFN-------ALFKTTAALDDRLSLEQLQHVKFGRIYGMSTRQ 396
            ..::..|         |.|::.:.|       .|.....|:|..   :.|:|.:..::|.:..| 
  Fly   122 HPIIAHVLNSVLTLRGDYGRSANNNQSRTICLQLQAVVGAVDGG---QDLRHYRLQQLYKILLR- 182

  Fly   397 GKAIFLKDV----LDEARDIMREKRNISATTRE----NYNLDDEHVC----DIL-----GVSAVL 444
                 |.|.    |.|..|  |:|..|..|...    |.....||||    .:|     |.|::.
  Fly   183 -----LVDYSSWRLVEPND--RQKDTICVTVELEKCCNGKQPVEHVCLTCGPVLEPINKGASSLT 240

  Fly   445 VN-VLKQRRQRDHEFSWQQ----------------------------------ALQV--NGDTGI 472
            |: .||.|.|.....:.|:                                  |:.|  || .||
  Fly   241 VDEYLKLRCQHMELMATQRSGMCPVPMSSLDTLTKRLAAAAVIVDLFVVRHSSAVSVVRNG-VGI 304

  Fly   473 -----KLQYTHCRLHSLLDNFR---------------DVDL----DDIKPDWKHFSTEPADALDL 513
                 .:.|...||.:||..|.               ::||    ||:  ||           :|
  Fly   305 CKGASYILYNSARLEALLRKFNYEVNNCAYEKLPLLDEIDLSVLEDDV--DW-----------EL 356

  Fly   514 LYA-LARFDQSVWQSKEQLEA--C---VLVNYLFGLCNATSQAL---KRLPVKQESSLEKQLQRL 569
            :|. |..|.:.:....:||:.  |   :||:|:..|..|.|:..   |.|..|::..:.....|:
  Fly   357 IYGYLLTFPELMESIMDQLDQGHCGLHLLVHYVENLAAAFSRFYYHKKVLLQKRDELMPILYARI 421

  Fly   570 LLFHAAKKTLRHGMELLGLRPLN 592
            .|..|.::.|...:.:||:.|::
  Fly   422 YLIKAVRQVLNTALAVLGIEPVD 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArgRS-mNP_001262351.1 ArgS 67..594 CDD:223097 105/478 (22%)
nt_trans 137..397 CDD:294020 41/194 (21%)
Anticodon_Ia_like 436..594 CDD:299868 50/232 (22%)
CG8097NP_001285279.1 DALR_1 311..445 CDD:214846 35/147 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0018
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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