DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17816 and Mdm1

DIOPT Version :10

Sequence 1:NP_001097706.1 Gene:CG17816 / 40928 FlyBaseID:FBgn0037525 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_001156376.1 Gene:Mdm1 / 17245 MGIID:96951 Length:718 Species:Mus musculus


Alignment Length:27 Identity:7/27 - (25%)
Similarity:9/27 - (33%) Gaps:6/27 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 YNL------TPIDNNNNCQNSTSSQQN 77
            |||      ||...:..|.....:..|
Mouse    26 YNLRPAIEATPYPKSFKCFTCEQASDN 52

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17816NP_001097706.1 MDM1 22..569 CDD:464751 7/27 (26%)
Mdm1NP_001156376.1 MDM1 9..554 CDD:464751 7/27 (26%)
ST]-E-Y-X(3)-F motif 1, required for efficient microtubule binding and stabilization. /evidence=ECO:0000250|UniProtKB:Q8TC05 9..15
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..166
ST]-E-Y-X(3)-F motif 2, required for efficient microtubule binding and stabilization. /evidence=ECO:0000250|UniProtKB:Q8TC05 193..199
ST]-E-Y-X(3)-F motif 3, required for efficient microtubule binding. /evidence=ECO:0000250|UniProtKB:Q8TC05 236..242
ST]-E-Y-X(3)-F motif 4, required for efficient microtubule binding and stabilization. /evidence=ECO:0000250|UniProtKB:Q8TC05 307..313
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..600
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.