DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2993 and Arrdc1

DIOPT Version :10

Sequence 1:NP_001262348.1 Gene:CG2993 / 40924 FlyBaseID:FBgn0037521 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_038961503.1 Gene:Arrdc1 / 366001 RGDID:1309961 Length:460 Species:Rattus norvegicus


Alignment Length:514 Identity:114/514 - (22%)
Similarity:186/514 - (36%) Gaps:158/514 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QG--VYYAGQELSGVVDLSVDATKRIKGIHVTVSGYAKIRWIKKGYPRDSERAMCRAY---RSYL 73
            ||  ||..|:.|:|.|.|.:.|....:.|.||..|...:          |.:|...|:   .||.
  Rat    13 QGRVVYSPGEPLAGAVHLRLGAPLPFRAIRVTCMGSCGV----------SNKANDGAWVVEESYF 67

  Fly    74 SSRSYVLGSCANNSSIDWPAGEYSYTFHVILPDNLPTSFDGKYGQIHYEIITTIERAARHPKVFK 138
            :|..    |.|:..|:  |.||:::.|..:||...||||:|.:|:|.:::..:|: ..|..|..|
  Rat    68 NSSL----SLADKGSL--PPGEHNFPFQFLLPATAPTSFEGPFGKIVHQVRASID-TPRFSKDHK 125

  Fly   139 --LPFTVIQPLDLNADAIYRVPLEILDRKRFWSFCCPTGPLTVKFSTPYCGYAPGQKIHFVLYIN 201
              |.|.::.||:||:......|......|:|......||.:.:..||...||..||.:.....|.
  Rat   126 CSLVFYILSPLNLN
SIPDIEQPNVASTTKKFSYKLVKTGSVVLTASTDLRGYVVGQVLRLQADIE 190

  Fly   202 NESSIDIIECEVKLKQEVSYESHDPQHEYRYDKHLIARKQFGNVLRWSRKVYRGYLDLPSIPPTS 266
            |:|..|.......|.|:|||::    ..:.||...||..:...|..|....::..:.:|::|.::
  Rat   191 NQSGKDTSPVVASLLQKVSYKA----KRWIYDVRTIAEVEGTGVKAWRHAQWQEQILVPALPQSA 251

  Fly   267 VKPTCP-ISVNYSIKIIVNP-----------------TEFHWKLK-----LKIPLTIGSIPIMDG 308
            : |.|. |.::|.:::...|                 ..|...:|     :.:||.:|:|.:...
  Rat   252 L-PGCSLIHIDYYLQVWCCPGLGGLRLGGLGLTLQYLRFFQVSMKAPEATVTLPLFVGNIAVNQT 315

  Fly   309 P--------------EALLRFNRQQQQHQVVSQNLQMSTQQRQRDRDRDRDMNVDRERDRDRDRD 359
            |              ..::.....|::.:.|:.....|                          |
  Rat   316 PLSPCPGPGSSPGLLSPVVPSAPPQEEAEAVASGPHFS--------------------------D 354

  Fly   360 RISASV----QQRRISSINNNNNNHGRLVGGLLPTNSNMNMITNVSPTPTSSTPS---------- 410
            .:|.|.    ||:.:|                  |......:|.:.|.....:|:          
  Rat   355 PVSLSTKSHSQQQPLS------------------TTLGSVSVTTIEPCVQVGSPARHSLHPPLCI 401

  Fly   411 ---------------STPTTAALRPTAMPAILVTSDSDNPPDYIPM-----MPPSYEDA 449
                           ..|||:||       ||       ||:|...     .|||||.:
  Rat   402 SIGATVPYFAEGSGGPVPTTSAL-------IL-------PPEYSSWGYPYEAPPSYEQS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2993NP_001262348.1 Arrestin_N 5..150 CDD:451447 44/142 (31%)
Arrestin_C 174..304 CDD:214976 35/152 (23%)
Arrdc1XP_038961503.1 Arrestin_N 7..139 CDD:451447 44/142 (31%)
Arrestin_C 162..310 CDD:460676 35/152 (23%)
PHA03247 <311..449 CDD:223021 29/194 (15%)

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