DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18268 and LDB19

DIOPT Version :10

Sequence 1:NP_649739.1 Gene:CG18268 / 40923 FlyBaseID:FBgn0037520 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_014967.3 Gene:LDB19 / 854500 SGDID:S000005849 Length:818 Species:Saccharomyces cerevisiae


Alignment Length:424 Identity:74/424 - (17%)
Similarity:134/424 - (31%) Gaps:159/424 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPINCEFNLSRAAAIYY------NGEQISGSLTVT-VDGKKSFKLEGVSVTLHGVSTVHWRESLR 58
            :|:....::.....:.|      :|..:||..||| ||...|.:.:.:..|...|||.  .:||:
Yeast    27 LPLTLSIDVESPPCVLYGSAMESSGAVLSGLFTVTVVDPYSSAEDKSLKNTESNVSTT--SKSLK 89

  Fly    59 ---------------------------GPPEIEHNDSTGNLEC----PKVDYNG------SKVHI 86
                                       ....|.|:.:..||..    .|:....      .|:|.
Yeast    90 RKSTFGSALSSRLSSLSASTSNISPSTSSTSISHSPTPANLRIMAGYTKITITSVTLSLVQKIHF 154

  Fly    87 N----------------ETKKLN-EVLQLENGTFRLG------DFNFQLPENLPATCRLPFG--- 125
            :                :||..| :..::::.|..|.      .|::.:|.::|  |....|   
Yeast   155 HKPFVPNISSMQTCMNCKTKITNMKSWEIQSNTQDLSVGSHSYPFSYLIPGSVP--CSSSLGATA 217

  Fly   126 --NVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLKPQYMETANMGLTLPRSVFVPGQSVSYE 188
              .|:|.|..|:.....|...|                       :.|.:.||            
Yeast   218 ETQVKYELIAVVTYIDPHRNSF-----------------------SSGHSTPR------------ 247

  Fly   189 ICSKDG--VQDFLTRLCKKISYTSQQPSAKTKNVTQVLSESSELNGNLRLPLTAPIMSHSDQLDP 251
               |:|  .:..|.:|...|:.|...|....||..:|. ..:||.....||              
Yeast   248 ---KEGSSSKKRLLQLAMPIAVTRSIPRGPDKNSLRVF-PPTELTAAAVLP-------------- 294

  Fly   252 IQISYYIETFNSLNAPIKVPIFVATVAPPVNSQTESSQLCFVNMALSQSELLGPINQFLANSCSR 316
             .:.|...||     |:::.:      ..|:|.....::..::..:.::      .:..|::|  
Yeast   295 -NVVYPKSTF-----PLEMKL------DGVSSGDRRWRMRKLSWRIEET------TRVKAHAC-- 339

  Fly   317 EIDALALSKHCER---ERIKLLKGPKRKKSYVHL 347
                 .:.||..|   |::|:.:..|.||...|:
Yeast   340 -----PVHKHELRQLEEQVKIKESEKSKKPRSHI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18268NP_649739.1 Arrestin_N 5..153 CDD:451447 39/219 (18%)
Arrestin_C 172..279 CDD:460676 20/108 (19%)
LDB19NP_014967.3 LDB19 144..346 CDD:404030 45/281 (16%)

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