DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18268 and arrdc3a

DIOPT Version :10

Sequence 1:NP_649739.1 Gene:CG18268 / 40923 FlyBaseID:FBgn0037520 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001073498.1 Gene:arrdc3a / 566685 ZFINID:ZDB-GENE-030131-2913 Length:414 Species:Danio rerio


Alignment Length:331 Identity:68/331 - (20%)
Similarity:136/331 - (41%) Gaps:69/331 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IYYNGEQISGSLTVTVDGKKSFKLEGVSVTLHGVSTVHWRESLRGPPEIEHNDSTGNLE--CPKV 77
            ::.:|:.:||.:.:.|.|:  .:::.:.:...|.:.|.|.||...      ..||...:  ..:|
Zfish    23 VFSSGDSVSGRVIIEVTGE--IRVKSLKINAKGFAKVRWTESRNA------GSSTAYTQNYTEEV 79

  Fly    78 DY-NGSKV---HINETKKLNEVL-QLENGTFRLGDFNFQLPEN-LPATCRLPFGNVEYVLKVVLE 136
            :| |...:   |..:.....|.| .:.:|..... |:|:||:. |..:.....|:|.|.:|..|.
Zfish    80 EYLNHRDILIGHERDDDNSEEGLTTIHSGRHEYA-FSFELPQTPLATSFEGKHGSVRYWVKAELH 143

  Fly   137 RRGTHNKCFQQRLVIRKCVELAD---LKPQ-----------YMETANMGLT--LPRSVFVPGQSV 185
            |........::...:.:.:::..   |.||           :..:..:.|:  :.|..:.||:|:
Zfish   144 RPWLLPMKTKKEFTVFEHIDIN
TPLLLSPQAGTKEKTLCCWFCTSGPISLSAKIERKGYTPGESI 208

  Fly   186 ----SYEICSKDGVQDFLTRLCKKISYTSQQ--PSAKTKNVTQVLS----------ESSELNGN- 233
                ..|.||...|      :.|...|.:|.  ...|.|.:.|:::          ::...||. 
Zfish   209 QIFAEIENCSSRMV------VPKAAIYQTQTFFAKGKMKEIKQLVANIRGESLSSGKTETWNGKM 267

  Fly   234 LRLPLTAPIMSHSDQLD--PIQISY----YIETFNSLNAPIKVPIFVATV-APPVNSQTES-SQL 290
            |::|..:|.:     ||  .|::.|    |::...::|..:.:|:.:.|: ..|..|:|.| |..
Zfish   268 LKIPPVSPSI-----LDCSIIRVEYSLMVYVDIPGAMNLSLNLPLVIGTIPLHPFGSRTSSVSSQ 327

  Fly   291 CFVNMA 296
            |.:.|:
Zfish   328 CSMTMS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18268NP_649739.1 Arrestin_N 5..153 CDD:451447 30/145 (21%)
Arrestin_C 172..279 CDD:460676 28/132 (21%)
arrdc3aNP_001073498.1 Arrestin_N 22..165 CDD:425619 30/150 (20%)
Arrestin_C 187..314 CDD:460676 28/137 (20%)

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